Micropterus salmoides (largemouth bass): 119900014
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Entry
119900014 CDS
T07309
Symbol
cnga1a
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119900014 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119900014 (cnga1a)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119900014 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Tim54
Motif
Other DBs
NCBI-GeneID:
119900014
NCBI-ProteinID:
XP_038570760
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MTTSATLPRLTVPPDTASQLATDSEELSEDELSGPQLSCHRLLNMNNNNNSEEXEKKEKK
EKKEKEQKEKEEKEAKEKEAKEKEAKEKEAKEKEKEKNKDKPKELFVINPAGSLYYNWLF
IITLPVMYNWTMIIARACFEELQHNFIIYWVFLDYTSDLIYLADMFVRTRTGYLEQGLMV
KDEKLLRDRYMASFQFRLDFISMVPTDVLYLYFGLDYPEIRINKLLRISRMMEFFTKTET
KTNYPNIFRIGNLIMYILIIIHWNACFFFSFSKSIGFGADDWVYPALDDPDEPAFGEPMR
KYAFSLYWSTLTLTTIGETPPPALDSEFLFHVVDFLVGVLVFATIVGNIATMISNMNAAQ
AQFQSRIDNIKQYMQVRKVSKDLELRVIKWFDYLWNNGKAQDEREVLRYLPDKLKAEIAI
QVHMDTLRKVRIFADCEAGLLIELVLKLRPQVFSPGDYICKKGDIGREMYIIKDGKLAVV
ADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMESLVE
YPDAKGMLEDKGRQILMKDGLIDLDPANIMPEVKELEEKVNKLYSTMELMQTKLKKILGN
YKNRDKVLRHRIKDLEHQTGEEVEDEDEEEEKVKKEEIAVEEEKKEDEKLEEGEGDGEKV
KKEEEKSEETKDEEGKGEEAKHEERKGEEAKEEEKT
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttcagcaactcttccccgcctgactgtgccacctgacactgcctcacaactt
gccacagacagtgaagagctcagcgaggatgagctaagtgggcctcaattaagttgtcat
cgtctgctcaatatgaataacaacaataacagtgaagagtaagagaagaaagagaagaaa
gaaaagaaggaaaaagagcagaaggaaaaggaagaaaaggaagcaaaggagaaagaggca
aaggaaaaggaggcaaaggaaaaagaggcaaaggaaaaagaaaaagaaaagaacaaagat
aagcccaaagaattgtttgtcattaatcctgctgggagtttgtattacaactggctgttc
atcatcacgctgccggtcatgtacaactggaccatgatcatagccagggcttgctttgag
gagctgcagcataacttcatcatttactgggtttttctggactacacatcagacttaatc
tacctggctgatatgtttgtcaggaccagaacaggttaccttgagcaaggcctgatggtg
aaagatgagaagctgctaagggatcgctacatggccagctttcagtttcgtctcgatttt
atctccatggtgcccactgacgtcctctatttatacttcggcctcgactacccagagatc
cgcatcaacaagctactgagaatcagccgcatgatggagttcttcacgaagacggagact
aaaaccaactaccccaacatcttccgcattggaaacttgatcatgtatatcctcattatc
atccactggaatgcttgcttcttcttctctttctccaaatccattggatttggtgctgac
gactgggtttacccggctctggatgatcctgacgagcctgcatttggggagcccatgagg
aagtatgcattcagcctctactggtccacactgaccctgacaaccattggagaaactcca
ccaccagccctggactcagaatttctcttccacgtggttgactttttagttggggtctta
gtctttgccaccattgttggaaacattgccaccatgatctcaaatatgaatgccgcccaa
gctcagtttcaatctcgaattgacaacatcaagcagtacatgcaggtccgaaaggtcagc
aaggatctcgagttgcgagtcatcaagtggtttgactatctgtggaataacggcaaggca
caggatgaaagagaggtactcaggtatcttccagacaaactaaaggcagagattgccatc
caagtccacatggataccctgaggaaagttcgtatttttgcagactgtgaggcaggcctt
ctgatcgagctagtgctcaagctgcgaccacaggtgttcagccccggagactatatctgc
aaaaagggtgacattggccgtgagatgtacatcatcaaagatggaaaacttgcggttgtt
gctgatgatggtgtcacacagtttgttgtgttgggaagtggcagctattttggtgaaatc
agtatccttaacattaaaggcagtaaagcaggcaaccggcgaacagccaacatccgcagc
attggatactcagacctcttctgcctgtccaaggatgacctgatggagtcactggtagag
tatccggatgccaaaggaatgctagaggacaaaggcaggcagatcctgatgaaagatggt
ctgatagatttggacccagctaacatcatgcctgaggtcaaagagctggaagagaaggtc
aacaaattgtacagcacaatggagctgatgcagaccaaactaaagaaaattctgggaaat
tataagaaccgtgacaaggttctcagacatcgcataaaagatctagagcaccaaacagga
gaagaagtggaagacgaggatgaggaggaagaaaaggttaaaaaggaagagatagcggtg
gaagaggagaaaaaggaagatgaaaagttggaagagggggagggagatggggagaaagta
aagaaagaagaggaaaagagcgaggagaccaaagatgaagaaggaaagggtgaagaggca
aaacatgaggaaagaaagggtgaagaagcaaaagaagaagagaaaacataa
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