Micropterus salmoides (largemouth bass): 119902669
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Entry
119902669 CDS
T07309
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119902669
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119902669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
zf-RING_6
zf-RING_10
DUF445
Gp58
PRP1_N
RSS_P20
Motif
Other DBs
NCBI-GeneID:
119902669
NCBI-ProteinID:
XP_038574927
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKTHWDEEDGMKIHSCPQCGQT
FTPRPVLLKSTMLAVVVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHYDAAPFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDREKDVKVLQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKRQLRSQQDTEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHTQFLHNYPSLSALSESTDSSSIKIRPLRYFEDVTAAVLEVRDKLQDVLRETWTNILKT
VTEVDVLLSEPEPKTRADFLKYSCDITLDPNTANKWLFLSEGNRKAMCQKQSYSSHPDRF
TRCCQVLSRESLTGRCYWEVEWRWGGVYVAVAYKNISRAGSSDECGFGLNEKSWALDCNK
NSYNFWYNNVQTHVSGPQSSRVGVYLDHSAGILSFYSISETMTLLHRVQTTFTQPLYAGL
LLLDYGATAEFCKVK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
acccactgggatgaagaggatggaatgaaaatccacagctgccctcagtgtgggcagacc
ttcacaccgaggcctgtcctgctgaaaagcaccatgttagcagttgtagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtctggtctgtctg
gcctcttactgtgagaaacaccttcagcctcattatgatgctgctccgttcaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagagagagctc
gaggtgagtcgccaaaacatccagcagagaatccaggacagagagaaagatgtgaaggtg
cttcagcaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctgatggagaaaagaaggtccgatgtgaagcggcag
ctcagatcccagcaggacactgaagtaagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacacccagtttctacacaactacccctcactgtcagcactcagtgaatctacagac
tcatccagcatcaagatccgtcctctgcgctactttgaggatgtgacagcagctgtgtta
gaagtcagagataaactacaggatgttctgagagagacatggacaaacatcttaaagaca
gtgactgaagtggatgttttattgtcagaaccagagcccaagaccagagctgacttctta
aaatattcatgtgacatcactctggatccaaacacagcaaacaaatggctgtttttatct
gaggggaacagaaaagcaatgtgtcaaaaacagtcttattctagtcatccagacagattc
actagatgttgtcaggttctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagatggggaggagtttatgtggcagttgcatacaagaatatcagcagagcaggg
agctcagatgaatgtggatttggactaaatgaaaaatcttgggctttagattgtaacaaa
aacagttataacttttggtacaacaatgtccaaactcacgtctcaggtcctcagtcctcc
agagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcatctctgaa
accatgactctcctccacagagtccagaccacattcactcagcctctctatgctggactt
ttgttattagattatggagccacagctgagttctgtaaagtcaaatag
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