KEGG   Micropterus salmoides (largemouth bass): 119903787
Entry
119903787         CDS       T07309                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119903787
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    119903787
SSDB
Motif
Pfam: PRY zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 SPRY zf-B_box zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_10 zf-RING_5 U-box zf-RING_6 zf-ANAPC11 DUF445 Gp58 zf-RING_4 PRP1_N RSS_P20 UvrD-helicase Prok-RING_4
Other DBs
NCBI-GeneID: 119903787
NCBI-ProteinID: XP_038575956
LinkDB
Position
Unknown
AA seq 556 aa
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEEEEKKIPSCPQCRQT
FTPRPVLLKNTMLAVLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHYDAAPFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDRQSICYLCPVDE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDREKDVKVLQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKRQLRSQQDTEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHTQFLHNYPSLSALSESTDSSSINIRPLRYFEDVTAAVSEVRDKLQDVLTETWTNVLET
VTEVDVLLSGPEPEPTTRAGFLRYSCEITLDPNTANTCLLLSEGNRKVTLMRKQQSYSSH
PDRFTGWPQVLSRESLTGRCYWEVEWRGGGVFIAVAYKNISRTGRSDECLFGFNDKSWAL
HCDRNDYNFLYNKVKTPVSGPRSSRVGVYLDHRAGILSFYSISKTMTLLHRVQTTFTQPL
YAGLCPFSSAEFCKVK
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggaggagaagaaaatccccagctgccctcagtgcaggcagacc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagttttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtctggtctgtctg
gcctcttactgtgagaaacacctgcagcctcattatgatgctgctccgttcaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcggcagagtatctgttatctctgccctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaaggtg
cttcagcaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcaccgagctgatccgtctgatggagaaaagaaggtccgatgtgaagcggcag
ctcagatcccagcaggacactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacacccagtttctacacaactacccctcactgtcagcactcagtgaatctacagac
tcatccagcatcaacatccgtcctctgcgctactttgaggacgtgacagcggctgtgtca
gaagtcagagacaaactacaggacgttctgacagagacatggacaaacgtcttagagaca
gtgactgaggtggatgttttactgtcaggaccagaaccagagcccacgaccagagctgga
ttcttaagatattcatgtgaaatcacactggatccaaacacagcaaacacatgtctgtta
ttatctgaggggaacagaaaagtaacattaatgagaaaacaacagtcttattctagtcac
ccagacagattcactggatggcctcaggtcctgagtagagagagtctgactggacgttgt
tactgggaggtggagtggagagggggaggagtttttatagcagtcgcatacaagaatatc
agcagaacagggaggtcagatgaatgtttatttggattcaatgacaaatcttgggcgtta
cattgtgacagaaacgattataactttctttacaacaaagtcaaaactcccgtctcaggt
cctcggtcctccagagtaggagtgtacctggatcacagagcaggtattctgtccttctac
agcatctctaaaaccatgactctcctccacagagtccagaccacattcactcagcctctc
tatgctggactttgtcctttttcttctgctgagttctgtaaagtgaaatag

DBGET integrated database retrieval system