Micropterus salmoides (largemouth bass): 119903787
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Entry
119903787 CDS
T07309
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119903787
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119903787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
U-box
zf-RING_6
zf-ANAPC11
DUF445
Gp58
zf-RING_4
PRP1_N
RSS_P20
UvrD-helicase
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119903787
NCBI-ProteinID:
XP_038575956
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEEEEKKIPSCPQCRQT
FTPRPVLLKNTMLAVLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHYDAAPFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDRQSICYLCPVDE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDREKDVKVLQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKRQLRSQQDTEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHTQFLHNYPSLSALSESTDSSSINIRPLRYFEDVTAAVSEVRDKLQDVLTETWTNVLET
VTEVDVLLSGPEPEPTTRAGFLRYSCEITLDPNTANTCLLLSEGNRKVTLMRKQQSYSSH
PDRFTGWPQVLSRESLTGRCYWEVEWRGGGVFIAVAYKNISRTGRSDECLFGFNDKSWAL
HCDRNDYNFLYNKVKTPVSGPRSSRVGVYLDHRAGILSFYSISKTMTLLHRVQTTFTQPL
YAGLCPFSSAEFCKVK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggaggagaagaaaatccccagctgccctcagtgcaggcagacc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagttttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtctggtctgtctg
gcctcttactgtgagaaacacctgcagcctcattatgatgctgctccgttcaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcggcagagtatctgttatctctgccctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaaggtg
cttcagcaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcaccgagctgatccgtctgatggagaaaagaaggtccgatgtgaagcggcag
ctcagatcccagcaggacactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacacccagtttctacacaactacccctcactgtcagcactcagtgaatctacagac
tcatccagcatcaacatccgtcctctgcgctactttgaggacgtgacagcggctgtgtca
gaagtcagagacaaactacaggacgttctgacagagacatggacaaacgtcttagagaca
gtgactgaggtggatgttttactgtcaggaccagaaccagagcccacgaccagagctgga
ttcttaagatattcatgtgaaatcacactggatccaaacacagcaaacacatgtctgtta
ttatctgaggggaacagaaaagtaacattaatgagaaaacaacagtcttattctagtcac
ccagacagattcactggatggcctcaggtcctgagtagagagagtctgactggacgttgt
tactgggaggtggagtggagagggggaggagtttttatagcagtcgcatacaagaatatc
agcagaacagggaggtcagatgaatgtttatttggattcaatgacaaatcttgggcgtta
cattgtgacagaaacgattataactttctttacaacaaagtcaaaactcccgtctcaggt
cctcggtcctccagagtaggagtgtacctggatcacagagcaggtattctgtccttctac
agcatctctaaaaccatgactctcctccacagagtccagaccacattcactcagcctctc
tatgctggactttgtcctttttcttctgctgagttctgtaaagtgaaatag
DBGET
integrated database retrieval system