Micropterus salmoides (largemouth bass): 119904194
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Entry
119904194 CDS
T07309
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119904194
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119904194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_2
zf-RING_5
zf-RING_6
DUF445
TRAF3_RING
PRP1_N
RSS_P20
Motif
Other DBs
NCBI-GeneID:
119904194
NCBI-ProteinID:
XP_038576641
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAQKGVQLDRAKFCCSICLDLLKDPVATPCGHSYCMNCIKSFWDEEDEKKIHSCPQCRQT
FTPRPVLLKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDFCTGRKLKALKSCLVCL
VSYCEKHLQPHYDVAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQSICYLCSVDE
HKGHDTVSAAAERTERQRELEVSRQNIQQRIQDRQKDVKVLQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRRSDVKRQLRSQQDTEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHNQFLHNYPSLSALSESTDSSSINIRPLRYFEDVTAAVSEVRDKLQDVLTETWTNILET
VTDVDVLLSDSEPKTRADFLKYSCELTLDPNTANTQLLLSKGNRKATVMKEQQSYSRHPD
RFTTCLQVLSRESLTGRCYWEVEWRGTGVNVAVAYKNISRAGSWTECGFGFNDKSWALHY
QNNSYNFWFNKVQTPVSGPRSSRLGVYLDHSAGILSFYSISETMTLLHRVQTTFTQPLCA
GLGFSWSSGDSAEFCKVK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgagcaaaattctgctgttcgatctgtctggat
ctgctgaaggatccggtggctactccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggatgagaagaaaatccacagctgccctcagtgtaggcagacc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatttctgcactgggagaaaactgaaagccctcaagtcctgtctggtctgtctg
gtctcttactgtgagaaacacctgcagcctcattatgatgtggctccgttaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagagtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggaccgagaggcagagagagctc
gaggtgagtcgacaaaacatccagcagagaatccaggacagacagaaagatgtgaaggtg
cttcagcaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcaccgagctgatccgtctgatggagaaaagaaggtctgatgtgaagcggcag
ctcagatcccagcaggacactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgaatctacagac
tcatccagcatcaacatccgtcctctgcgctactttgaggatgtgacagcggctgtgtca
gaagtcagagataaactacaggacgttctgacagagacatggacaaacatcttagagaca
gtgactgatgtggatgttttactgtcagactcagagcccaagaccagagctgacttctta
aaatattcatgtgaactcactctggatccaaacacagcaaacacacagctgttattatct
aaggggaacagaaaagcaacagtaatgaaagaacaacagtcttattctcgtcacccagac
agattcactacatgtcttcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagagggacaggagttaacgtagcagtcgcctacaagaacatcagcaga
gcagggagctggactgaatgtggatttgggtttaatgataaatcttgggcgttacattat
cagaacaacagttataacttttggttcaacaaagtccaaactcccgtctcaggtcctcgg
tcctccagattaggagtgtacctggatcacagtgcaggtattctgtccttctacagcatc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctgtgct
ggacttgggttttcttggtcttctggagactctgctgagttctgtaaagtcaaatag
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