Micropterus salmoides (largemouth bass): 119916369
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Entry
119916369 CDS
T07309
Symbol
jmjd1cb
Name
(RefSeq) LOW QUALITY PROTEIN: probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119916369 (jmjd1cb)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119916369 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
119916369
NCBI-ProteinID:
XP_038592286
LinkDB
All DBs
Position
Unknown
AA seq
2913 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPPEIGDFGRWPWRSGVIRAVNHRDSDNPDLTAYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGGAGAGGGAGGLLLGTKAKHIQWPALT
FKPVVGKSLLSPVTAVEFLLDRQLDFLSDHSAYQPYQDEVDSQNPVLRDNHQLHEEVTGW
LKDQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQN
VDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNSAHMAGGRPGGTTGNTQSHYT
RAQANSPRPIMTSLGPNPKGSQGMLTSQQQSQSQQSQQPASQSHNSPGGSGREQREQRNS
RSSRRKGSDSSVPEEDKDRREETTGRDSKSKAKQAVNKRRKGEEDEKKAGLKRLKTDMTS
DLSESSDSENPHNKRTAHSSCSSSSSSSSSSSSSSSSSSSEPNSENELKTRSSDVKPSGV
SKKEEDEKPLMHGTKLNDSSSLISRLSPWVELQAEDSKKGLVKETSKMITKEEEELVAVT
QITQSPRQQTPLSSDPIQGGIMESSKNTMKVSSRSQTPSLSHLHGGSVIDITDDAQATVH
QESSEAVSALLASQKAESTSLSPYLPLNPSPVSSPPVPPSPSPSEGGRRTDIEPPMQQQV
IMGGGMTAARSLGNKIEFAPSEVIRPVTSITENMVLVEKEKTVLPHHLLLHHHQQQQQHH
QQLQQQQHYTSIHPSIKSLSEETRKHSQQQPPPNKMNTVLPPDLAKSKMSPNPAQVDSLK
QKLQHPNNSQCHPYPNTNPSDFLKAKPHPALLDISKPKPNTSPEVSKHKIQRYSDTSPPP
TGRLSAKVEIAEPPRSGFKPVLARSESGGISTSSSSSTKSPLIIDKNETFTVYRDPALVR
SDAENSASATVSSNHVAAYLHPHLHTLHSPSPHSPCLTPASHPHGASHLLAPPHTSALPH
PHLLPPGVLSAMPPPAASLLGGHPRLDSPGGLGHLALPHPAATHQQQFLQGQGPPPPPLL
AQAHSGAAGLGLYPILWQYPNGTPTSYTPGLNLPPTAKWVHPENPVTVNSEASLRRNTPS
PWLHQAAGSAGDGLGLLSHVPVRPASADAHRPPVKINTHTSPPLSKASTDIRKEDVDKKG
FVDPIRTLTLAQLKQEQTDRSRTPTGKDVLLHHLYLDPHSKARLANTQDAVQAADRASKY
KEENRQILKESIEVAPFTAKIQRSSDPGMDRDRERSRDSAFPVRIPALASPSPKASHAHP
HVIQSEKSNYFTTLSNSVVNEPPRLYPSKELNSYYEKVSSGAPGVVASVGAVVSSQGALS
LGSYISKASLSKPPPLIKHQPEGGEGLAGKITEQLSQQVTLVQQQHQHHTGIDRIERRSP
AISSSSSSTSSSFSSAPNHHHHHHHHHHHQQQQQQQHQLRVMPSLHRAPVFHPPTQHALE
RKEAAEREREREKERERERERAGYGGRLSPPTLTPIQPVSLAAAGNKTSAEQQKPPTLLP
ELRDVKGHGNAAAVNCVPSAISAEIMTSPTDVWRGGEMIQERGGLFSGEKGLSRGKPQAA
MASVIVRPSTSIKYDSSVGANKSGALIHKELPQGRLYPSKLQGECPRLGECVREPGAGRI
IQHNSNLDDMSVQYKKTSMRDMQGTMGASTTNSVCRTAVSAASAFGIQIKSPTYFPELGY
SVSARGEISAHNTGIGGWALSHSGSGEHQEELGSRTTSPAGSLPPPSPAGTPQPCQSLTP
TPSSISGSSQPYSSSFVHLKKHKAALAAAQSRSNFSTTPTSTTTGNFSLTVDSGEKIPIH
NSPPPPSSSQASSSSIDSSSSSSASGSTTPGKSSPLPNGHTSGSASTSSGQPSNYHKLKK
AWLTRHSEEDRNTTATTSATSAKPEKQLSTTTSTSNTTAMSDMIKPCTVNLSASTSSEVD
MSKDGGSKVERERQLEEKVGGAAGGGEERKAAPLSRRGNKRSYESGSESGGDDSDNSESK
MEGRAKRQPKPTYKKKQNDMAKKKGDNEKDEDDMKPNGIFRSAREKTKLKLASSNGIPRS
VLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVVRSKKGEEPAHSPVFCRFYYF
RRLSYSKNGVIRMDGFSTPDQFDDEALALWVPGVMEESHLDQTTAKYILSFIGDKFCQMV
VTENTAATWVKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKER
RNSKDKELYGWLKCVKGQPHDHKHLMPTQIIPGTVLTELVTSMHSLREKHNIKSYCPCTN
KQNLLTKLPATNGVSQVLQNVLNHSNKLSLVKAEPGSDRGGTKAETNGGGVGGSSPGSDA
GSAAVTPPESQSPLHFLADLAEQKSREEKKENKESVLLGKSVKEDKRGDSLEVLQQCKTT
SLVANSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPVYSTASQTGKGGRTMPNILDDII
ASVVENKIPASRQNITTKLSIKQEPVTLGNNNNNNPASAVTEDAKPERKKSAPVTAAVSE
ESANHYPDISHCWLNNRQLLWLKDHRNQNNWKLFRECWKQGQPVLVSGIHKRLNASLWKA
DSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDLTKRPKSKDGEPMVYRLKDWPSGE
EFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPRLCCAYGVAASQDQ
DFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDVDEGVRRRLKDSSETPG
ALWHIYLNRDMDKVREFLHKLCTEQGLDVSLDQDPIREQSLYLSRKQRQRLLDEHGVQGW
TVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSFHLTQELRPNKEEVNYED
KLQVKNILYHCVKEAVSSLKRGSAEEDDEEENS
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcgaccggagctggtcggaaagcggttcctctgtgtcagcggggac
gagcctcctgaaatcggcgacttcggtcggtggccgtggaggtctggagtcatacgggcc
gttaaccatcgtgacagcgacaatcccgacctgacggcatatgtggagtttgatgaccag
gaatgggagaagagagagtgggtgaaggtctatgaggatttccagctgtttctattggag
caccagctggtctgggccaagagaaaggagggagcaggaggaggagcaggagcaggtgga
ggagcaggaggcctactgctgggaaccaaggccaaacacatacagtggcctgccctgaca
tttaagccagtagtggggaagagcctgttgtcgccagtaacagcagtggaattcttgtta
gaccgacagctggacttcctgtctgaccattcagcctaccaaccataccaggatgaggtg
gacagtcagaacccagtgttaagagacaaccatcagctccatgaagaagtgacaggctgg
ctcaaagaccagaaggtgcaggaaatttttatgcaaggtccctattcattgaatggctac
cgcgtgcgtgtttacagacaagactcagctacccagtggttcactggcatcattacacac
cacgatctcttcagtcgaaacatggtcgtcatgaatgaccaggtgctagagcctcagaac
gtggatccatctatggtccagatgacctttctggatgacgtggtccactccctgctgaaa
ggagaaaacattggcatcacttcaagacgaaggtcacgttccagccagaacaacaactct
gcccacatggcgggagggagacccggcgggaccactggcaacactcagagtcattacaca
cgagcccaagccaacagcccccgccccatcatgacttcattgggccctaacccaaaaggt
tcccaggggatgctgacctcccagcagcagagccaatcacagcaaagccagcaaccagcc
agccaatcacacaactcgcccggcggcagtgggcgggaacagagagagcagcgcaactct
cgctcttccaggaggaaaggatcagatagcagtgttccagaggaggataaggacaggaga
gaagagaccacagggagagactccaagtcaaaggcaaagcaggcggtgaacaaacgcagg
aaaggcgaggaagatgagaagaaggcaggtttaaagaggctgaagactgacatgacctct
gatctgtcggagagcagcgactcagaaaacccacacaacaagaggaccgcccactcctca
tgctcctcctcctcctcatcgtcttcgtcgtcgtcgtcctcctcctcttcctcctcctca
gagcccaactctgagaatgagctaaagactcgcagcagtgatgtgaaaccaagcggtgtt
tccaaaaaagaggaagatgagaagcctctgatgcatggcaccaaactgaacgattcctct
tctctcattagtcgcctgtccccgtgggtggagcttcaagcagaggacagcaagaagggt
ctggttaaggaaacaagcaaaatgataacaaaggaggaggaggaattggtcgctgtaaca
cagatcacacagtctccacggcaacagacgcctctgagttctgaccccatccagggcggc
attatggagagcagcaagaacactatgaaagtgtcatctcggtcccagacgccgtcttta
tcccacctccacggtggcagtgtgattgacatcacagatgatgcccaggcgacggtgcac
caggagagttcagaggcagtgtctgcgctgctcgcctcccagaaggccgagtccacgtcc
ctctcaccttacctcccactcaacccctctcccgtctcctcgcctcccgtcccgccatct
ccttctccatcagaaggaggccgcagaacagatattgagcctcccatgcagcagcaggtt
attatgggaggtggcatgacagcagccaggagcttaggcaacaagatagagtttgctccc
tctgaagtcatcaggcctgtcacatctataactgaaaatatggtgcttgtggagaaagag
aaaacggtccttcctcatcatcttcttcttcatcatcatcagcagcagcagcagcatcat
cagcagctgcagcagcagcaacactacacatctatccaccccagcattaagagtctgtct
gaggagacaagaaaacactcacagcaacaaccgccccccaacaagatgaacacagtcctc
cccccggacttagccaaatccaaaatgagccccaacccagctcaggtcgactccctgaaa
cagaaacttcagcaccccaacaactctcaatgccatccctaccccaacacaaacccaagt
gactttctcaaggctaagccccacccagccctgctggacatctccaaacctaaacccaac
acctccccagaggtctctaaacataaaatacagaggtactctgatacctccccacctccg
acaggccgtttgtccgctaaagtagaaatagcagaacctccaaggtctggtttcaagccg
gtgctagcgcggtcagagtcgggaggaattagtacgagcagcagcagcagtaccaagagc
cctctgatcatcgataagaacgagaccttcactgtttacagggacccagcactggtccgc
tcagatgcagagaactctgcctctgccaccgtctcctccaaccatgtggcagcctatctt
catccccacctgcacaccctccactccccctcccctcactccccctgcctcacccccgct
tcacatccccacggcgcttcccacctcctcgctcctcctcacacctctgctctaccccac
ccgcaccttttaccccccggggtgctctctgccatgcctcctcctgcagcatctcttctc
gggggacaccctcggctcgactcccctggtgggttgggccacctcgccctgcctcatccg
gcagccacacaccagcagcagttcctacagggtcagggcccccctccacctcctctacta
gcccaggctcacagtggagcagcagggctgggcctataccccatcctctggcagtacccc
aacggaacaccaacctcctataccccagggctcaacctgccccccacagctaagtgggtc
cacccagaaaatcctgtcaccgtgaattccgaggcttctctcaggaggaacacaccaagt
ccatggcttcatcaggctgctggtagtgctggtgatggcctcggtttgctgagccacgtt
cctgttcggccagccagtgcagatgcccaccgcccccctgtcaagatcaacacacacaca
agccctccactttcaaaggccagcacggacattcgtaaggaagatgtagataagaaaggc
tttgtggacccgatcaggacgctgacgttggcccagctgaaacaggagcagacagacagg
agtcgaacccccacaggaaaagatgtcctcctacaccacctctacctagacccccacagc
aaggctcgcctggcaaatacacaggatgcagttcaggcagcagaccgagccagtaaatat
aaagaggagaatcgtcaaatcctgaaagagagtatagaggtcgctcccttcactgctaag
atccagcgctccagtgaccccggcatggacagggacagagagaggagcagagattcagcc
ttccccgtccgcataccagctcttgcctccccaagccccaaggccagccacgcccatccc
catgtcatccagtcagaaaagagcaactacttcactacgctgtccaacagtgtggtgaat
gagcctccaagactttacccctccaaggagctcaactcttactatgaaaaggtgtccagc
ggagctccaggggttgtggccagtgttggggccgtggtgtcaagtcagggagctctgtcc
ctgggcagctacatctctaaagcctccctctccaagcctcctcccctcattaagcaccaa
ccagaaggaggagagggtttagcagggaaaatcacggagcagctcagccagcaggtgaca
ctagtccaacagcaacatcagcaccacaccggtatagacaggatagaacgtcgcagccct
gccatttcttcttcctcctcctccacatcctcctctttctcctcagcccccaaccaccat
catcaccaccaccaccaccaccaccaccaacagcagcagcagcagcaacaccagctcagg
gtaatgccatctctacaccgagcgcctgtcttccatccgcccacacagcacgcactggag
cgtaaagaggctgcagagcgagagagggagcgggagaaggaaagagaacgagagagggag
agagcaggttatggtggacgtctgtctccgccaaccctcacacccatccagccagttagc
ttagcggcagcgggtaacaaaacatcagcggagcagcagaagccccccactctgctgccg
gagctcagggacgtcaaaggtcatggaaatgctgccgctgtcaactgtgtgccctcagcc
atcagtgcggagattatgacttcacctacagacgtgtggcgaggtggagagatgattcag
gaaagaggaggcttattctcgggagagaaaggactatcaaggggcaagccccaagctgca
atggcatcagtcattgtgcgtccgtcgacatctattaagtatgacagttctgttggtgct
aacaaatctggtgctttgatccataaggagctcccccaggggagactctatccatccaag
cttcagggggaatgtcctagactaggggagtgtgttagagaacctggagcaggaaggatt
atccagcacaactccaacctggacgacatgtctgtccagtataaaaagacttctatgcgt
gacatgcagggaactatgggagccagtaccacaaactctgtgtgcaggactgccgtttca
gctgcatcagcttttggcatacagattaaaagtccgacatacttcccagagctgggctac
tcagtctcagctcggggagagatttcagcccataacactggcattggtggctgggcactg
agccactcaggttcaggagagcaccaggaggagttaggctcacgtaccacatctccagcg
gggtctctgcctccccctagtccagcagggacaccccagccctgtcaaagcctcacccca
acacccagctcaatttctggttcaagtcaaccttactcctcctcctttgtccaccttaag
aagcacaaagctgccttggctgcagcccaatccagaagcaacttctccactactcccaca
tccaccacaactggaaacttctccctaactgtggattcaggggagaaaattcccattcac
aactcgcctcctccaccctcttccagccaagcctcatcatcctccatcgacagcagtagc
agcagctcggcaagcgggagcacaacaccaggcaagtctagtcccctgcctaatggccat
acctctggatcagcctcaacaagcagcgggcagcccagtaactaccacaagctgaagaaa
gcctggttaacccgacactcagaggaggacaggaacacaactgctactacaagcgccacc
agtgctaaaccagagaaacagctcagcaccaccaccagcacaagtaacaccacagccatg
tctgatatgatcaaaccctgtaccgtcaatctcagcgcctccacctccagtgaggtggac
atgagcaaagacggtggaagcaaagtcgagagagagaggcagctggaggagaaggtggga
ggagcagcaggaggaggggaggagaggaaagcagctcctttatcaaggcgaggtaacaaa
cggtcatacgagtccggttcagagagtgggggagatgactctgacaacagtgaaagcaaa
atggagggccgagccaagcgtcagcctaaaccaacctacaagaagaaacagaatgatatg
gccaagaagaaaggagacaatgaaaaggatgaagatgatatgaagcccaatggcatcttc
agatcagccagagagaagactaaactcaagctggccagcagcaatgggattccccgctcc
gttctgaaggactggaggaaggtgaagaagctgaagcagacaggggagtctttcctgcag
gatgactcgtgttcagaaattggacccaacttgcaaaagtgtcgggagtgcagggtggtc
cgcagcaagaagggcgaggagccggcacattcccctgtcttctgtcggttctactatttc
agacggctttcctacagtaaaaatggagttatccggatggatggcttctccactccagac
cagtttgatgatgaagccctggccctgtgggtccctggggtgatggaggagagccacctg
gaccaaaccacagccaagtatatcctcagcttcatcggagacaagttctgtcagatggtt
gtgactgagaatactgcagccacctgggtcaagaaggatgccaagctggcgtggaaacga
gctgtgaggggggtgagagagatgtgtgacgcctgcgaggcaacactctttaacatccac
tgggtttgtcagaaatgtggctttgttgtctgcttggactgctacaaggccaaggagaga
aggaactccaaagataaagaactatacggctggctgaagtgtgtgaaaggccagcctcat
gatcataaacacctgatgccaacacagatcatacctggcacagtgctgacagagttggtg
acttccatgcactctttgagagaaaaacacaacatcaaatcctactgtccttgtaccaac
aagcagaacctcctcaccaaacttccagccaccaacggagtctcacaggttctgcagaac
gtcctgaaccacagtaacaaactgtctctggtgaaagctgagccaggctctgaccgagga
ggcaccaaggcagagacaaacggaggaggtgttggaggaagcagtccaggcagcgatgca
ggaagtgctgctgtcaccccaccagagtcccagtcacctctgcactttctggctgatctg
gcagagcagaaatctagggaagaaaagaaagaaaacaaggagtcagtgctgttgggtaaa
tcagtgaaagaagacaaaaggggagacagcctggaggtcctgcagcagtgtaaaaccacc
tcactcgtggctaacagtacggagcagggctccacactcagagatctgctcaccaccaca
gcagggaaactgaagctgggctctactgatgctggaatcgcttttgcaccagtctactct
actgcttcacagactggaaaaggtggtcggaccatgcccaatatccttgatgacatcatc
gcttcagtagttgagaataaaatccccgccagccgccagaacatcaccaccaaactgtca
atcaagcaggagcctgtcaccctaggcaacaataacaacaacaaccctgcctctgctgtt
actgaagatgccaaaccagagaggaagaagtcagcgcctgttactgcagcagtgtcagag
gaatcagccaatcactatccagatatttcccattgctggttaaacaacagacagttactg
tggctcaaagatcaccgcaaccagaacaactggaagctgttcagagaatgctggaaacaa
ggacagcctgtgttggtgtcagggatccataagcgactgaatgccagtctgtggaaagct
gactccttcaaccaggagtttgcagaccatcagggagacctcctcaactgtaaagaccag
gtggtgtccaactccggaatcaaggagttctgggatggatttgaggacctcaccaagcga
cccaaatccaaggatggagaacctatggtctacagactgaaggactggccatctggagaa
gagttcatggccctaatgccctcaagatatgatgacttgatgaagaacctgcccctgcca
gagtactcagatccagagggcaacctcaacttggcctcccacctgccatctttctttgtc
aggccagatctggggccaagactatgctgtgcctacggtgtagctgcgtctcaggaccag
gactttgggactgccaacctccatgtagaagtttcagatgtcgtctctgttctggtctat
gtgggagtagctaaaggcaatggagtcctgtctaaaactggagtgttgaagcgtctggag
gaggaggatgtagatgagggggttcggagaaggctgaaagactccagtgagacaccgggg
gcactgtggcacatctacctcaacagagacatggacaaagtccgagagttcctgcacaag
ctctgtacggagcagggactggatgtgtcgcttgaccaggacccaatcagagaacagagc
ttgtacctgagcaggaagcagcgtcagcggctgctggatgaacacggagttcagggctgg
actgtggttcaattcctgggagattctgtacttattccagcaggggccatgcaccaggtc
cagaacctccacagttgtgttcaggtcatcaatgactttgtgtctcccgagcatgtggcc
aactccttccacctgacccaggagctccgacccaataaagaggaggtcaactatgaggac
aaactacaggtgaagaacatcctgtaccactgtgtaaaggaggccgtcagctccctgaag
aggggtagcgctgaggaagatgacgaggaagagaactcatga
DBGET
integrated database retrieval system
