Micropterus salmoides (largemouth bass): 119916406
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Entry
119916406 CDS
T07309
Name
(RefSeq) transcription factor Sox-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119916406
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119916406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119916406
NCBI-ProteinID:
XP_038592331
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MQEIWGFYLISRGNILYISHTVVHFYALGEFLGNPADIKTFYPPTMTEENMSLTDHPRSP
VGSDSSMSQHRSDSESPTSPAVSDAQDAARPPGITHKPESSVENDRFPACIRDAVSHVLK
GYDWSLVPMPSQGERGLKSKPHVKRPMNAFMVWAQAARKKLADQYPHLHNAELSKTLGKL
WRLLSETEKRPFIEEAERLRLQHKKDYPDYKYQPRRRKSSKPGQGDCRPRLVQQQHQQGL
YKTEPGEGHHHPDRTGQSHGPPTPPTTPKTELHMGNKHGGHLPADSSTGSAPPASRQNID
FSNVDISELSTDVISAIDVFDVHEFDQYLPPNSHGSTVLTPPDTSHGHNNPSGSFILPSI
HSHSHSISTWTPKSGTSPGMPPSSSSCDRHGHPQDPIQRPQIKIEQLSPGHYSSSSTPEL
PQQPEHTSLGSGVCPLSTSSSTSINQSDYTDLQSSSFYSAYSGYPAGLYQYPYFHSSRRP
YATPLINSLALAPPPHSPPSGWEQPIYTTLTRP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaatttggggattttacttaatttcgaggggaaacatattatatatatcccac
acagtcgtgcacttttacgcacttggagagttcctcgggaatccggccgatataaaaact
ttttatccgccaacaatgacagaagagaacatgtccttgacggaccatccacgcagtcca
gtgggcagcgacagctcgatgtcccagcatcgttcggattcagagtccccgacctctcca
gcagtgtccgacgcacaggacgcagctcgcccgcccgggattacgcacaaaccggagagc
agcgtggagaatgatcgcttccccgcctgcatccgagacgcggtgtctcacgtgctgaaa
ggttacgactggtcgctggtaccgatgccctctcaaggggagagagggctgaagagcaaa
cctcatgtgaaacggccgatgaacgcgttcatggtttgggcgcaggcagcgcggaagaag
ctggctgaccagtatcctcatctacacaacgctgagctcagcaagactctgggcaaactg
tggcgacttctctctgaaacagagaaacgtcccttcattgaggaggcagagagactgagg
ctgcagcacaagaaagactacccagactacaagtaccagcctcggagacgtaagagctcc
aaaccgggacagggggactgtagacccagactggtccagcagcagcatcagcagggcttg
tacaagacagaaccaggggaagggcaccatcatccagacaggacaggtcagtctcatgga
cctccaacgcctcccactacccctaaaaccgaacttcacatggggaacaaacatgggggc
cacctccctgcagacagcagcaccggctctgctcctcccgccagccgccagaacattgac
ttcagcaacgtggacatctcagagctcagcactgatgtcatcagcgccatagacgtattt
gatgtccacgagtttgaccagtacctccctcccaacagccacggctccactgttctgacc
ccacctgataccagccacggacataataacccttctggatccttcatcctacccagcatc
cattctcactcccacagcatttccacttggacccccaaaagtgggacttcccctggaatg
ccaccatcctcttccagttgtgacaggcatgggcacccccaggaccccatccaaagacct
cagattaaaattgagcagctgagtccaggtcactacagcagctcctccactcctgaacta
ccacaacaacctgagcacacctccctcggttcaggagtctgccctttatccacttcctcc
tcaacctccatcaaccaatctgactacactgaccttcaaagctccagtttctacagcgcc
tactctgggtaccctgccggtctgtatcagtacccgtactttcactcctctcgcagacct
tatgccacaccgcttatcaacagcttggccttggcaccacctccgcacagtcctccctct
ggctgggagcagcctatctacacaacactcaccaggccttga
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integrated database retrieval system