Mycobacteroides saopaulense: MYCSP_14835
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Entry
MYCSP_14835 CDS
T05445
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msao
Mycobacteroides saopaulense
Pathway
msao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYCSP_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msao03400
]
MYCSP_14835
Enzymes [BR:
msao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MYCSP_14835
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MYCSP_14835
DNA repair and recombination proteins [BR:
msao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYCSP_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
ALR12469
LinkDB
All DBs
Position
complement(3001985..3002836)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVEVVRRGLHHHLVGKTIAAAAVHHERAVRRQAGGAVELTGLLTGQQISGTGRRG
KYLWLTLGDGQALVVHLGMSGQMLIGPISRPQHLRIAATLDDGSVLSFVDQRTFGGWMVT
DLVSVDGSELPEPVAHIARDPLDERFDVSTVVTRLRGKHTEIKRALLDQTVVSGVGNIYA
DEALWQAKVHGRRLTDGMSRAKLTGVLDSAAGVMRLALAQGGTSFDDLYVNVNGESGYFD
RSLEAYGREGEPCRRCGRAMRREAFMNRSSYFCPSCQRLVEPR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtggaggtggtccgccgcggactgcaccatcacctcgtcggc
aagaccatcgcggcggcggccgtgcaccatgagcgcgccgtgcgcaggcaggccggcggc
gccgtcgagctgacgggattgcttactggacaacagatcagcggtaccggacgccggggt
aagtatctgtggctcaccctgggtgacggtcaggcattggtggtgcacctcgggatgagt
ggccagatgctcatcggaccgatctccaggccgcaacatctacgtatcgccgcgacgctc
gacgacggatcggtgctgagcttcgtcgaccagcgcaccttcggcggctggatggtgacc
gacctggtcagcgtggacggaagcgagctccccgaaccggttgcgcatatcgcccgggat
ccactcgacgagcggttcgatgtgtcgacggtggttacccggttgcgcggcaagcacacc
gagatcaagcgcgcgctgctggatcagaccgtggtgtccggtgtcgggaacatctacgcc
gacgaggcgctgtggcaggcgaaggtgcacggccgacgcctcaccgacggcatgagccgt
gccaagctcaccggggttctcgacagtgccgccggggtcatgcgcttggcgctcgcccag
ggcggcacctcgttcgacgatttgtatgtgaacgtgaacggcgaatccgggtatttcgac
cgctcgttggaggcctacgggcgcgagggcgaaccgtgccgcaggtgcggacgcgccatg
cgccgggaggccttcatgaaccggtcgtcctacttctgcccgagctgtcaacggctggtt
gaaccgcgttaa
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integrated database retrieval system
