Myxococcus stipitatus: MYSTI_04350
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Entry
MYSTI_04350 CDS
T02436
Name
(GenBank) DEAD/DEAH box helicase
Organism
msd
Myxococcus stipitatus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AGC45648
UniProt:
L7UC42
LinkDB
All DBs
Position
complement(5631162..5637473)
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AA seq
2103 aa
AA seq
DB search
MSKHYQFDAYQAYHALQGRYADFLLDVFGVRPGPLANVLRSHWSSDSGFSLFAPLLVQAA
FPFRPGKTLTDLQAVSTKQRTIERPLHPKTVSLLKKAGIDYPLFEHQVDTIRAASHGKTV
VLSAGTGSGKTEAFVIPLIDRLFWDHEEGRDDLGQPGVRAVVVYPLNALVNNQVDRMLAM
LGGQDEINFAYYTSRLKDSWRSAKNSYERRGKLVPPKCQIIDRATLRGLDGGDGRPKGPP
HVLVTNFSMLEYMLIRPSDRTIFEPENLFYGEHPRLKMMVLDEAHVYAGAQAAEIHMLLR
RAAQRFGTTLEAVQGFATSATLAQEESEGRAVLDEYASRMFAKKSNVKSVEGRRYLPEEA
RTPRQVPELRPPATLAADQQLIAADLRTLKYEDSGNPSALLRDAALANTSWKACEALGLV
TEAERAQLPAEIADCPALLLHHVYATHPRLIELRKWLFEQKELPDIDQVAVKVYGPADSS
EQRRRATDALLRLGSLARHDAKLHPFIPIRMHALVRAPTGVWVDPRPPETKIVEGWPWGA
VTSIAPSGAPDETPRAQLGVCAECGAPYLVAYRVGEAKELRLEKADNAVRLAVRPKKGME
DVLCVDGTRVPVEFRELGAADRHGRSPMSSCLQCNTVATRLRPLLLSPRAALGAVVDMVY
PHLGEMPPSTAEQEFRPGGGRRLLTFSDSRQEAARIAAVVESTHDTGVNRQLIVTALRDE
GGQATVKELARTLGQNELLLERAASRALEQPESLEYLGLLSIYEELARPPSRANTLETLG
IVEVVYPNLPPCPNDALPYFGSDMVWKDFIAQLLDFARSRGVVIKPSTDEPEAEEKLGHF
LPNTIGNKLVWSTAEDLSDEDESEAEDEDVGRDIPMYPRRHPETGRMYDYTARVRERLKM
PDSMGVDSLLSLAWIALTQHSAQGCKWLRLKQDKLQIDLSRLELRLHEQPPLVDVDSGRV
YFRSVGGVVPVPKCPRALSPMSDDARTLWAARHSVRRILEDPLLGLHSVEHTAQIGVDSL
EGEESAFRRGERNLLASSTTLEMGVDIGGLTFVMMTNVPPSPANYWQRAGRAGRRADGSS
MVLTLALNRPHDQLVFTSPRRFLHSEMTPPQVRLDASPLLLRHVNASLLAAFFEEAVERD
NAGSPMRAFGTVDEFLFRPAIGGGGMDKQFADKLDLHSEDPLAHAFERWLDKLDDDSSVA
PQIRALTQGTILATYSLSELAASCSKALARAVETVSRDYKVLKEQRERELQKGESARDET
FLAALSHQERVLLIETLIACLARNGFLPRFGFPLDIVHLDTKWKFRRKKDKGEQNDDEDE
RKQQEEQLDLRMERALDIALSEYAPGSEIIAGKKLHRVAGVVRNWLAGDETSVVQHFYLE
CEKCGHFGDHNAWPRACEICGHPTVFQEEALESATEATGRRRRKKKATEDAETPLEAGEV
LPSRVRRYMRPSGFAVKAGRRPRRVGSEIDRMPSPRVTVRASNSLGLVELLPAGVIGGFT
ANSTVFVRSEGRSERPGGPGFGFAICQRCGFAEPEESFEGSVPEAFVEHDRLRGFRPCEG
RGTWRHAVLGTSITVDAFRLRLTKEFRPTVLPNEEEAFFHTFAAYLQLVAARRLQIDPRA
LHGAVAMWQDANPRNGHDGGSAREAVVYEPSGSGMLRHLMDDPVALLRDVVTMIEKKDEA
QIIRFDTQFLAARGMLRVDLLRAHFLDPARKMLLDAANPIEKHRAAALRGRGPMLAAIEL
VEDTGSELGLQATEIAGDALEAGGLLRSVLRRVLDAEKHVPQLLLSRLPDASGKNDEDAV
VAVHLRRLIESGMHIRIAAPADRKVIGEDVWQLLSIGPTRAAAIGGVPTTGSEGPRFGSA
WLDGCIPIEAKPEAAKEAWSRFAERWGRGQPVTVADLTPNSPNARPLVEIAKGVVNPDLV
YTWRLIRSQLGELNQLGRVTRLAYNDRHLGKSAIALWMLGELLQRFAYAPNAEGKIWTRA
AEGYDGQTKTSDELFKLKKAPGNLGPKQSEMLAKWCSVEAGKKGLDLRFERRFELEHPRK
LVVEFAPGGKHSSLKVLFDSGLDWAECKSVVGPWTQGPFQTRTTHVSIYLDLPVGNDLAS
LGV
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacattatcaattcgacgcctaccaagcatatcatgcgctgcaggggcgctac
gccgacttcctgctcgacgtgtttggagtgcggcccgggcctctcgcgaacgttcttcgc
tcgcattggagcagcgacagcggcttctcgctgttcgctccgctgctcgttcaagccgcg
ttcccattccgccctgggaagacgcttaccgaccttcaagcagtctcgaccaagcagcgc
acaatagagcgcccactgcacccgaagacggtctcattgctgaagaaggcgggaatcgac
tacccgctgttcgagcaccaggtcgacacgattcgtgcagcttcccacggcaagactgtg
gtcctctccgcgggcacgggcagtggaaaaaccgaggcgttcgtcatcccgctcattgat
cgcctcttctgggatcatgaggagggccgcgacgatctcggccagccgggtgtgcgcgct
gtggttgtctaccctctcaacgcgcttgtgaacaaccaagtggatcgcatgctggcgatg
cttggtgggcaagatgagatcaacttcgcttactacaccagccgactgaaggactcgtgg
cgttcggcaaagaactcctacgagcgccgaggcaagctggtgccgccgaaatgccagatt
atcgaccgcgcgacgctgcgtggacttgatggtggtgatggtcgacccaagggaccgccg
cacgttctcgtcaccaacttcagcatgctcgagtacatgctgatccgtccgagcgaccgg
acgatcttcgagcccgagaaccttttctacggcgaacatccgcgtctcaagatgatggtg
ctcgacgaagctcacgtttacgctggcgcgcaggctgccgagatccacatgctgctgcgc
cgcgctgcgcagcgcttcggcaccacgctagaagcggttcaggggttcgcgacttccgcg
acgctcgcgcaggaagagagcgaaggacgcgctgtgctcgatgagtacgcgtcccgcatg
ttcgcgaagaagagtaacgtgaagtccgtcgagggacgccgctatctgccggaggaagcc
cgcacgccgcgccaggtgccggaacttagacctcccgcaacgcttgctgccgatcagcag
ttgatcgccgcagacctccgcacgctcaaatacgaggactcgggtaatccctccgcatta
cttcgtgatgctgcgctcgccaacacctcgtggaaggcatgcgaagcgctcgggctggtg
accgaggcagagcgcgcgcagttgcccgcggagatcgccgactgcccagctctcctcctg
catcacgtgtacgccacgcatccgcggctcatcgagctgcgcaagtggctcttcgaacag
aaggagctgcccgacatcgatcaggtcgctgtcaaggtgtatggtcctgccgattcgagt
gagcagcgacgacgcgcgaccgatgcgctcctgcgcctcggctcgctcgcacgccatgat
gccaagctgcacccgttcatcccgatccgtatgcatgcgcttgtgcgcgcgccgaccggt
gtctgggtcgatccgcgcccgcccgagacgaagatcgtcgaggggtggccctggggggcg
gtaacttccatcgcaccttccggtgctcccgacgaaactccgcgtgcgcagcttggcgtc
tgcgctgaatgtggtgcgccttaccttgtcgcttatcgagttggcgaggccaaggagcta
cggctcgagaaggcggacaatgcggtccgccttgctgttcgcccgaagaaaggcatggag
gacgtgctgtgcgtcgacggaacgcgcgtccctgtcgagttcagggagctcggggcggcg
gaccgtcacggacgttcgccaatgagctcttgcctgcagtgcaatacggttgctacccgg
cttcgccctctactgctcagcccgcgcgcggcgctcggcgcggtggtcgatatggtgtac
ccgcaccttggagagatgccgccgagcactgcggagcaggagttccgcccaggcggcggg
cgccgcctgctcacgttctcggatagccgccaagaagcggctcgtatcgctgcagtcgtg
gagagcacacacgacaccggcgtcaaccgccaactcatcgtcactgcgctccgtgacgag
ggcggtcaggcgacggtgaaggagttggcgcgcacgctcggccaaaatgagctgctcctc
gagcgagcagcctcgcgtgctcttgagcagcccgaatcgctcgaatacctcggcctgctc
tcaatctatgaggagcttgcgagaccgccaagccgcgccaacacgctggaaacgctcggt
atcgtcgaggtcgtgtaccccaacctgccgccgtgcccgaacgatgcgctgccctacttt
ggtagcgacatggtatggaaggactttatcgcccagttgcttgactttgcgcgtagccgc
ggcgtggtaatcaagcccagcaccgacgagccggaagcagaggaaaagctcgggcacttc
cttccgaacacgatcggcaacaagctcgtttggagcacggcggaggatctgtcggacgag
gacgaatccgaggcggaagacgaagatgtcggccgcgacatccctatgtacccgcgccga
catcccgagactggccggatgtacgactacacagcgcgcgtgcgcgagcgcctcaagatg
cccgattcgatgggcgtcgactccctgctctcactcgcctggatcgcgctaactcagcat
tcggcgcagggctgcaagtggctccggctgaagcaggacaagctccagatcgatctgtcg
cgccttgagctccggcttcatgagcaaccgccgctcgtcgacgtcgactcaggccgtgtc
tatttccgctccgtgggcggtgtggttccggtgccaaagtgcccgcgcgccctctcgccg
atgagtgacgacgcgcggacactctgggctgctcgtcactcagtacgccgcatcctcgag
gatccgctcctcggcctgcacagcgttgagcacacggcgcagatcggagtcgactcgctc
gaaggggaagaaagcgccttccgccgtggcgagcgaaacctgctcgcatcatcgaccacg
ctggagatgggcgttgacatcggaggcctcactttcgtgatgatgaccaacgtgccgccg
agtcccgcgaactactggcagcgagcaggtcgtgccggccgccgtgcagacggctcgtca
atggtgctcactctcgcgctcaatcgaccgcacgatcagttggtgttcaccagcccgcgg
cgtttcctccactcagagatgacgccaccgcaggttcgccttgacgcatcgccgcttctg
cttcggcacgtgaacgcttcgctgctagctgcgttctttgaggaagcggtggagcgcgac
aacgccggcagcccgatgcgcgcgtttggaacggtcgacgagttcctgttccgacctgcc
atcggtggtggcggtatggacaagcaattcgccgacaagctcgatttgcatagtgaggac
ccgctcgcacatgcattcgaacgatggctcgacaagctcgacgacgattcaagcgtggct
ccgcagatccgcgctctgacgcagggcacgatattggcaacgtattcgctatccgagctg
gctgcttcttgctccaaggcgctcgcgcgtgcagtcgagacggtcagcagagattacaaa
gtgctcaaggaacagcgtgagcgcgagttgcagaaaggtgagtccgcgcgtgacgagacg
ttcctcgccgctctctcccaccaagagcgcgtgcttcttattgagacgctgatcgcatgt
ctggcgcgaaacggattcttgccgcgcttcggctttccgctcgacatcgtgcatctcgac
acgaagtggaagttcaggaggaagaaggacaagggcgagcagaatgacgacgaggacgag
cggaagcagcaggaagagcagctcgatctgcgtatggagcgcgcccttgacatcgcgcta
agcgagtacgcgcctggctccgaaatcattgctggcaagaaactgcaccgcgtcgcgggc
gtagttcgcaactggctggccggcgatgagaccagcgtcgtgcagcacttttatcttgag
tgcgagaaatgcgggcatttcggggaccacaatgcttggccaagagcatgtgagatctgt
ggtcacccaacggtgttccaggaggaggcgttggagtcggccacggaggcgactggacgc
cggcgtcgaaagaagaaggccaccgaggatgcggagacgccgctcgaggcgggtgaggtt
cttccgagccgcgtgcgccgctacatgcggccaagtggcttcgcggtcaaagccggtcgc
cggccgcggcgagtgggctccgaaattgatcggatgccttccccgcgcgtgaccgttcgc
gcctccaactccctgggccttgtagagctccttcccgccggcgtcataggtggcttcacc
gccaactcgacggtctttgtgcgctccgagggtaggtctgagcggccgggcggacctggg
ttcggcttcgccatctgtcagcgctgcgggtttgccgaaccggaggaatcctttgaaggt
tccgttcccgaggcgttcgtggagcatgatcgactccgaggattccgcccctgtgaaggc
cggggcacttggcggcatgccgttctcggcacttcgataaccgtcgatgcattccgactg
cggctgacaaaggagttccgtcctaccgtcctgccgaatgaggaggaagcgttcttccac
acgttcgcggcttacctacagctcgttgcggcgcgaaggctccaaatcgatccgcgtgcg
ctacacggagctgtcgcaatgtggcaggacgctaacccgagaaacgggcacgatggcggc
tcagcacgagaggcggtcgtgtacgagcccagcggctccggcatgctgcggcacctcatg
gacgatccggttgcgcttcttcgcgacgtggtcaccatgatcgagaaaaaagacgaggcg
cagatcatccgcttcgacacgcagttcctcgccgcccgcggtatgctacgcgtcgatctg
cttcgggcgcacttccttgatcccgcgcgcaagatgctgctcgatgcggcaaatccgatt
gaaaagcacagggccgcagcgttgcgtggacgcgggccaatgctcgctgcaattgagctg
gtcgaggatactggctcggagctcgggctccaagccaccgagatcgctggtgatgcgctc
gaggcgggtgggctcttgcgttccgtgctacggcgcgtgcttgacgcggaaaagcacgtg
ccgcagctgctgctcagccgcctgcccgacgccagtggaaagaacgacgaggatgccgtc
gtcgccgttcatctgcggcgactgatcgagagcggaatgcacatacgcatcgctgcccct
gcggatcgaaaggtgatcggcgaagacgtgtggcagctcctctccatcggtcctacgcgc
gctgcggccatcggcggtgtaccgactacgggcagcgagggtccgcgcttcggctctgcg
tggctcgatggttgcattcccatcgaggcgaagcccgaggctgcgaaggaggcatggtca
aggttcgccgagcgctggggacgcggccagccggtgacggtggcagatctcacgccgaac
tcgcccaatgcccgtccgctcgtcgagatcgcaaagggtgtggtcaaccccgaccttgtc
tatacgtggcggctgatccggtcgcagctcggcgagctgaaccagttagggagggtgacg
aggctcgcatacaatgatcggcacctcggcaagagcgcgatcgcgctgtggatgctcggc
gagctgctccaacgcttcgcctatgcgccgaatgccgagggcaagatttggacgcgcgcg
gcggagggctacgacggccagacgaagaccagcgacgaattgtttaagctgaagaaggct
ccgggcaacctcgggccaaagcagtccgagatgctggcgaagtggtgctcagtcgaggcg
ggcaaaaaaggtctcgacctgcgttttgaacgccgctttgaactcgaacacccacgcaaa
cttgtggtcgagttcgcgccgggcggcaagcacagctcgctcaaagtgctcttcgacagc
ggcctcgattgggcagagtgcaaatcggtggtgggaccgtggacgcaggggccgttccag
acccgaacgacgcacgtgagcatctatttggatctgccggtcggcaacgatctcgcttcg
ctcggagtttga
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