Methanolobus sediminis: RE474_09570
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Entry
RE474_09570 CDS
T09570
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mseb
Methanolobus sediminis
Pathway
mseb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RE474_09570 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mseb03400
]
RE474_09570 (uvrB)
DNA repair and recombination proteins [BR:
mseb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE474_09570 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RE474_09570 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
Microtub_bd
AAA_30
AAA_7
AAA_5
DUF87
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WMW24338
UniProt:
A0AA51UIS5
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All DBs
Position
1939015..1940997
Genome browser
AA seq
660 aa
AA seq
DB search
MRPFKLVSEYSPKGDQPKAISQLTEGMLAGKKHQTLLGVTGSGKTFTVANVIQNVQKPTL
VIAHNKTLAAQLFSEFREFFPDNAVEYFVSYYDYYQPEAYLPTTDTYIEKDASINEEIDR
LRLSATKSLLERKDVIVVSSVSCIYNLGSPDEWRAMSVMLTPGMEIDRPSFLESLINIQY
ERNDVAFTQGTFRLRGDTIEIFPAQEKEGIRIELFGDEIDRIAYFDTLTGKVLEEVLPGE
TIGIYPAKHFVMPEEYIDKALGTIEAELHDRLAVLRSENRLLEAQRLEQRTKFDMEMIRE
LGYCSGIENYSRHFDGRRPGEPPSSLLNFFPEDYLLVIDESHVTIPQIRGMHNGDRARKQ
SLVEYGFRLPSALDNRPLRYDEFERRLDNVIYVSATPAEYEIEKSKAVVEQIIRPTGLVD
PEISVRPVENQVDDLIGEIRKVTAKGFRTLVTTLTKRMSEDLTEYLLELGIRVRYMHSDI
ETLERAEIVRDLRKGEFDVLIGINLLREGLDIPEVAFVAILDADKEGFLRSERSLIQTIG
RASRNSEGRVILYADNMTGSMERAINETERRRKLQMEFNEEHGITPTTIRKALQKELVEG
EKYKPASGVLAIAEDASAREIKDIIIDLEADMHLAAKNLEFERAAELRDRIKELREEYSL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctttcaaactagtttctgaatacagtccgaagggtgatcaacccaaggcaatt
tcccagctcactgaaggtatgctggcaggaaagaaacaccagacattgctcggtgtgaca
ggttcaggaaaaaccttcacagtcgccaatgtcatacagaacgtgcagaaaccaactctg
gttattgctcacaacaaaacccttgctgcacagctcttttctgagttcagggagtttttt
cccgacaacgccgtggagtattttgtcagttattatgattactatcagccagaggcatat
ttgcctacaaccgatacctacattgaaaaggatgcgtcaatcaacgaagagatagacagg
ttgagactttcggcaaccaagtctttactggaacgcaaagatgtgattgtggtttccagt
gtgtcatgtatctacaaccttggttctcctgatgaatggagggctatgtctgtgatgctg
actcccggaatggagattgacaggccatctttccttgagtcactgattaacatacaatat
gaaaggaacgatgttgctttcacgcagggtactttccgcttgcgcggggatacgatagag
atattcccggcacaggagaaagaaggaataaggatcgaactctttggtgatgagattgac
aggatcgcctattttgatacgctaacaggcaaagtgcttgaggaagtgcttccgggggag
actattggtatttatcctgccaaacacttcgttatgcctgaggagtatattgacaaggcg
ttgggcacaattgaggctgaacttcatgacaggttggctgtgctgaggtcggagaatcgt
ttgcttgaggctcagagactggaacagaggaccaagtttgacatggaaatgatacgtgag
cttggttattgcagtggtattgagaattactcccggcactttgacggccgccgtcccggc
gagcctccatcgtccctgcttaatttcttccctgaagattatcttctggttatcgatgaa
tcacatgtgaccatcccgcagatacgtggaatgcacaacggtgacagggcaaggaaacaa
tctctggtagaatatggtttcaggttgccttctgctcttgataacaggccgctgcgctat
gatgagtttgagagacggcttgacaatgttatttatgtttctgccacacctgcggagtat
gaaattgagaagagcaaggctgtggtggaacagatcattcgtcctactggccttgttgat
ccggaaatttctgtaaggcccgttgagaatcaggtggatgaccttatcggtgagatccgc
aaggtcactgcaaagggattcagaactcttgtgacgactttgaccaaaaggatgtccgag
gatttgacggaatatctgctggagcttggtatcagggtgcgttacatgcactcggatatt
gaaacacttgagcgtgcggagatcgtcagggatttgagaaaaggtgagttcgatgtgctt
atcggtatcaacctgcttcgtgagggtctcgatattccggaggttgcttttgttgcgata
ctggatgctgataaggagggtttcctgcgttcagagcgttcacttatccagactatcgga
cgtgcttcgaggaattcggaagggcgtgtcattctgtatgctgacaatatgactggttcc
atggaacgcgccattaatgagactgagagacgtcgcaagctccagatggaattcaatgag
gagcatggtattactccgactacaattcgcaaggctctgcaaaaggagcttgtggagggc
gagaaatacaaacctgcatccggtgttctggcaattgccgaggatgcatcggcacgtgag
atcaaagatattatcatcgaccttgaggctgatatgcaccttgcagccaagaatcttgaa
tttgagagggcggcagaacttcgcgacaggataaaggaactcagggaagagtattccctg
tga
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