Marinobacterium sediminicola: LN244_06015
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Entry
LN244_06015 CDS
T07998
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
msec
Marinobacterium sediminicola
Pathway
msec01501
beta-Lactam resistance
msec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN244_06015
01503 Cationic antimicrobial peptide (CAMP) resistance
LN244_06015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msec02000
]
LN244_06015
01504 Antimicrobial resistance genes [BR:
msec01504
]
LN244_06015
Transporters [BR:
msec02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LN244_06015
Antimicrobial resistance genes [BR:
msec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LN244_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ULG70368
LinkDB
All DBs
Position
1290659..1293814
Genome browser
AA seq
1051 aa
AA seq
DB search
MSFSNFFIRRPIFATVIAIILTLVGIVSLRVLPIEQYPSVVPPSVSVKARFPGANAETVA
QTVAAPLAEAINGVENMLYMTSTSADNGLMNLEVAFDIGTNGDTNTINVNNRVQGALSKL
PEAVQAQGVTVELRSSSILVLMALISPEGDYDNIYMQNYATLNVLDELRQLPGVGAAEVL
GGGEFAMRVWMDPEKLAQYDLTPTEVARAIRAQNTEVPAGSLAGTPQSDPRAYTYTVTAG
GRLSSADDFRNIFLRTNADGSALLLKDVARIELGASFYGIDARLDSASMTPIVINQQPGA
NALETADAVKRKMAELADRFPPGLEFVVPYDTTLFITESVDTVVKTFIEAFLIVGVILYV
FLQNWRFTVIAMSVVPVSVVATFAGFYLFDFSLNLLTLFALVLSIGIVVDDAILVVENVE
RVLGDDPNISVREATVRAMKEVGGPVIATSLIMAAVFIPVAFLGGFTGQIYKQFALTVAI
SVGFSALMALTFTPALSAVFIKHHKSGNKANGFLRALHAPLRLFDQGFNVVTEFYTRLVD
ILVRRWVLALLLTAGFSAGSWWMYQSTPTTLVPQTDQGIILASISLPDAASLDRTSRYMD
AVSQQIQAIPGVAHVAAVAGYDILSSAVNNARGIMFISLVPWEQRDLTVDQLIGQVMQIG
AKTPGGSAMAFNMPPIRGLSTTGGFTGYLQSYAGASSEELYMASLKVMQAANQHPALNRV
FTTFNVNVPSYRANIDRQKALSYGVALEDLNATLSNTLGNGFVNFFSYQNRNFQVYLQNE
DEYRQKPDDLNTIFVRSNSGERIPLSEFVTLERQTGPAVVSRFGVYLGAQFQGGPAQGYS
SGQAIAAMEEVVQQTLGDDWGMGWTGTAYQETTLGNTASLAVGFGILMMFLILAAQYESW
SLPLAVLTATPFAFFGAISGIMMRGLEVSVYVEIGVLVVVGLAAKNAILIVEFAELQRRE
MGKSIREAAVTAAKLRFRPIVMTSLAFILGTLPLALATGASDTSSHHIGTAVSVGMASVA
IIGSCLIPTFYAMIASVSDWISRRRGVVEAH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctccaacttcttcatccgtcgaccgattttcgcaacggtaatcgcgattatt
ctgactctggtcggcattgtcagcttgcgtgtgctgccgatcgagcagtatcccagtgtt
gtgcccccaagtgtatcggttaaggcgcgtttcccgggtgccaatgctgaaaccgtcgca
cagacggtggcagccccgctggcagaggcaatcaacggcgtcgaaaacatgttgtatatg
acctcgaccagcgccgacaacggtctaatgaaccttgaagtggccttcgatattggcacg
aacggtgataccaacactattaacgtgaacaaccgtgtacagggcgcgttgtcgaagctg
cccgaagccgttcaggcacagggggttaccgttgaactgcgttccagctccattctggta
ctgatggcgttgatttcgccggaaggtgattacgacaacatctacatgcagaactatgcc
accctcaatgttcttgatgagctgcgccagctgccgggtgtcggtgcggccgaggtgctg
gggggcggcgagtttgccatgcgtgtctggatggatcctgaaaagctggcgcaatacgac
ctgacgccgactgaagtggcgcgagccattcgtgcgcagaacacggaagtaccggcaggc
agtttggccggaactccgcagagcgatccccgtgcctacacctatacggtcaccgccggt
gggcgcttgtccagtgctgatgattttcgcaatattttcctgagaaccaatgcggacggt
tctgcgctgctgctgaaggatgtggcccgcatcgaactgggggcgtctttctacgggatc
gatgcccgtctcgacagcgccagtatgaccccgatcgtcatcaaccagcagccgggagcg
aatgccctcgaaaccgcggatgcggtcaagcgcaagatggctgagctggccgatcgcttc
ccgccggggctggagtttgttgtcccctatgacaccacactgtttatcactgagtcggtc
gatactgtggtgaagaccttcattgaggccttcctgattgtgggtgtcattctgtatgtg
tttctgcagaactggcgttttaccgtaatcgccatgtcggtggtgcccgtgtcggtggtt
gcgacctttgccggcttctatctgttcgatttctcgctcaacctgctaacgctgtttgcc
ttggtactgtcgataggcatcgtcgtggatgacgccattctggtggttgagaatgttgag
cgtgtgctgggtgatgatcccaatatcagtgtgcgagaagctacagtcagagccatgaaa
gaagtgggtggcccggtcatcgcaacctcgctgatcatggccgccgtctttatcccggtg
gcgtttctcggtggctttacgggtcagatctataaacagtttgccctcaccgtcgccata
tcggtcggtttctcggcactgatggcgctgacatttacaccggcgttgtcggcggtgttc
atcaagcatcacaagtcgggcaacaaggcaaatggcttcctgcgtgcccttcatgcacct
ttgcggctgtttgatcagggctttaatgttgttaccgaattctatactcggctcgtcgat
attctggtgcgtcgctgggttttggcattgctgttgacggcaggattcagcgcaggctcc
tggtggatgtaccagagcacgccaacgacgctggtgccccagaccgatcaagggatcatt
ctggccagcatctcgttgcctgatgccgcttcgctggatcggaccagtcgttatatggat
gcagtcagtcagcagatccaggcgattccgggtgtggcgcatgtggctgcggttgcgggc
tacgatattttgagcagcgccgtgaacaatgcgcgaggcatcatgttcatcagtctggtg
ccctgggaacagcgtgacttgaccgtggatcagctcatcgggcaggtcatgcagatagga
gcgaaaacacctggaggcagtgccatggcgttcaatatgccgccaattcgtgggctgtcg
acgaccggtggctttaccggctatctgcagtcctatgccggcgcttcctcggaagaactc
tacatggcgtcactgaaagtgatgcaggctgccaaccagcacccggccctgaatcgtgta
ttcacgacattcaacgtcaacgtgccatcctatcgcgccaatatcgatcgccagaaggcg
ttgagttacggcgtggctttggaagacctgaacgccaccttgtcgaatactttgggcaat
ggcttcgtcaatttcttcagttaccagaaccgaaacttccaggtctatctgcagaatgag
gatgagtatcgtcagaagccggatgacctcaacaccattttcgtgcgcagcaatagcgga
gaacgcattccgctgtccgagttcgtgaccctcgaacgccagacggggccagcggtcgta
tcgcgctttggggtttatcttggggcgcagttccagggtggtccggcacaggggtacagc
tcgggtcaggcaatagccgccatggaggaagtggttcagcagacactcggtgatgactgg
ggaatgggctggacagggactgcctatcaggaaaccacactggggaataccgcatcactg
gctgttggctttggcattctgatgatgttcctgatccttgccgctcagtatgagagctgg
tccttgccgctggcggtactgacggctacgccttttgccttcttcggtgccatcagcggt
atcatgatgcgaggcctcgaagtgagtgtctatgtggagatcggtgtgctggtggtagtg
gggctggcggcgaagaatgccatcctgatcgtcgagtttgctgagctgcaacgtcgcgag
atgggtaagtcgatacgggaagccgcggtaacggccgcgaagttgcgattccggccgatc
gtgatgacatcgctggcgtttattctgggaacgttgccgctggcattggccaccggagcc
agtgacaccagcagccatcacatcgggactgcagtctcggtcggaatggcgtcagtggcg
atcattggcagctgcttaatacccaccttctacgccatgattgcatcggtttccgactgg
atcagtcgcaggcggggtgtggtggaagcgcattga
DBGET
integrated database retrieval system
