Microbacterium sediminis: E3O41_08920
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Entry
E3O41_08920 CDS
T06576
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
msed
Microbacterium sediminis
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msed03009
]
E3O41_08920
Enzymes [BR:
msed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
E3O41_08920
Ribosome biogenesis [BR:
msed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3O41_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBR74499
UniProt:
A0A1B9N961
LinkDB
All DBs
Position
complement(1872170..1873090)
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AA seq
306 aa
AA seq
DB search
MESRRLPVPDGLDGSRVDAALAKMLGFSRTFAAEVAEAGGVQLDGVTVGKSDRVTAGSWI
DVEWRAKEEPRVIPVEVPELAIVHQDDDIVVIDKPTGVAAHPSLGWEGPTVLGALLGAGV
AVATSGAAERQGIVHRLDVGTSGLMVVAKTERAYTLLKRAFKERTVDKVYHAVVQGHPDP
LAGTIDAPIGRHPNHSWKFAVTPEGKDSVTHYETIEAFPGASLLEIHLETGRTHQIRVHM
AAHRHPCVGDPLYGADPTMSARLGLTRQWLHAHRLGFEHPGTGEWVAFESAYPADLQHAL
DILRGE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcgtcggcttcccgtccccgacgggctggacggctcgcgcgtcgacgcggcg
ctggccaagatgctcggcttctcgcgcaccttcgcggccgaggtggccgaggccggtggc
gtgcagctcgacggcgtcacggtcggcaagtccgaccgggtcacggccgggtcgtggatc
gacgtggagtggcgggccaaggaggagccccgggtcatcccggtcgaggtacccgagctg
gcgatcgtccatcaggacgacgacatcgtcgtgatcgacaagcccacgggcgtcgccgcg
cacccgtcgctcggctgggagggtccgaccgtgctcggcgcgctgctgggtgccggcgtg
gcggtcgccacgagcggtgccgcggagcgccaggggatcgttcaccgcctcgacgtgggc
acgagcggcctcatggtcgtggccaagaccgagcgcgcgtacacgctgctcaagcgcgcg
ttcaaggagcgcacggtcgacaaggtctaccacgccgtcgtccaggggcaccccgacccg
ctcgccggcacgatcgacgcccccatcgggcggcacccgaatcactcgtggaagttcgcg
gtgacgccggagggcaaggactccgtgacgcactacgagacgatcgaggcctttcccggg
gcgtccctgctcgagatccatctcgagaccggccgcacccaccagatccgcgtgcacatg
gccgcccaccgtcacccgtgtgtgggcgacccgctctacggcgccgaccccacgatgtcg
gcgcgcctcggtctcacccggcagtggctccacgcccatcgcctcggcttcgagcacccc
ggcacgggggagtgggtcgcgttcgagtccgcctaccccgccgacctccagcacgcgctc
gacatcctccgcggcgagtag
DBGET
integrated database retrieval system
