Mycolicibacterium sediminis: MSEDJ_24330
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Entry
MSEDJ_24330 CDS
T07629
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00521
Streptomycin biosynthesis
msei00523
Polyketide sugar unit biosynthesis
msei00541
O-Antigen nucleotide sugar biosynthesis
msei01100
Metabolic pathways
msei01110
Biosynthesis of secondary metabolites
msei01250
Biosynthesis of nucleotide sugars
Module
msei_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MSEDJ_24330 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSEDJ_24330 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSEDJ_24330 (rmlC)
Enzymes [BR:
msei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MSEDJ_24330 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBY28337
UniProt:
A0A7I7QQW2
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Position
complement(2501993..2502586)
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AA seq
197 aa
AA seq
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MTFREMRIPGAWVITPVVHPDSRGVFYEWFTDREFTEMTGHRLDLHQANVSVSAAGVLRG
LHFSRLPPGQAKYVTCLRGAVFDVVVDVRVGSPTFGQWDSVLLDDQDRRSVYLSEGLAHG
FLAMEDESTVAYMCSSGYQPDREFAIRATDPAIAVDWPISDVALSDRDAAAPLLADVRAA
ELLPTWDEARTFTDGLH
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttccgcgagatgcggatccccggtgcctgggtgatcacgccggtcgtccatccc
gattctcgcggcgtcttctacgagtggttcaccgaccgcgagttcaccgagatgaccggc
caccgcctggatctgcaccaggccaacgtgtcggtgtccgcggccggtgtgcttcgcggc
ctgcacttctcccggctgccgccgggccaggccaagtacgtgacgtgtctgcgcggcgcg
gtgttcgacgtcgtcgtcgacgtccgggtcggctcgccgaccttcggacagtgggactcc
gtcctgctcgacgatcaggaccgccgctcggtctacctgtccgaggggctcgcgcacggt
ttcctcgccatggaggacgagtcgacggtcgcctacatgtgctcctcggggtaccagccc
gaccgcgagttcgccattcgtgccaccgatccggcgatcgccgtcgactggccgatctcg
gacgtcgcgctctccgaccgcgacgccgcggcgccactgctggccgacgtccgggccgcc
gagctgctgcccacgtgggacgaggctcggacgttcaccgacggcctgcactga
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