Mycolicibacterium sediminis: MSEDJ_32040
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Entry
MSEDJ_32040 CDS
T07629
Symbol
lig_2
Name
(GenBank) putative DNA ligase
Organism
msei
Mycolicibacterium sediminis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BBY29108
UniProt:
A0A7I7QRT9
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Position
complement(3301631..3303160)
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AA seq
509 aa
AA seq
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MLLVDVATASADVGAVPGRLAKTARIADLLAATDGDPRLAAVIVSWLSGELPQRQIGVGW
AALRALPAPASDPTLTVAEVDATFSEIGGVSGKGSQTRRAELLAGIFGAATAVEQTFLRR
LLGGELRQGALIGVMVDAVAKAAGVPAPVVRRAAMLGGDLPAVAAQALSGGEAALAEFTL
VVGRPVGPMLAQTATGVAAALEKLGGTAVFEAKLDGARVQIHRDGDRVSVYTRTLDDVTD
RLPEVVAATLALPVRTLIADGEAIALRPDGRPDRFQVTASRFGSRGTRDAATQPLSVFFF
DVLHVDGTDLLDAPVTERLEVLDSIVPASQRVDRLATADAGAAAEFLAATLAAGHEGVMA
KSPTSPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDDRTGGFVM
LGKTFKGMTDEMLAWQTERFLGLADGPTDGYVVTVRPEQVVEIALDGVQGSTRYPAGMAL
RFARVVRYRDDKRPDEADTVETVRALYER
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctcgtcgacgtcgccaccgcctccgccgacgtgggcgcggtcccgggccggctc
gccaagaccgcccgcatcgccgacctgctcgcggcgaccgacggggatccccggctggcc
gcggtgatcgtgtcctggctctcgggtgagctgccacagcgtcagatcggcgtgggctgg
gcggcgctacgcgccctgccggcacccgcctcggatcccacgctgaccgtcgccgaggtc
gacgccacgttcagcgagatcggcggcgtctccggcaaggggtcgcagacccggcgcgcc
gaactgctggccgggatcttcggcgccgccaccgccgtcgagcagacctttctgcgccgt
ctgctcggcggtgaactccgccagggcgcactgatcggggtgatggtcgacgccgtcgcc
aaggctgccggcgtaccggccccggtggtgcgccgggcggcgatgctcggcggcgatctg
cccgcggtcgccgcccaggcgttgtcggggggcgaggcggcgctggccgagttcacgctc
gtcgtcgggcgacccgtcggcccgatgctggcgcagaccgccacgggtgtcgccgcggca
ctcgagaagctcggcggcacggcggtgttcgaggccaagctcgacggcgcccgcgtgcag
atccaccgggacggcgaccgggtgtcggtctacacgcgcaccctcgacgacgtcaccgac
cggctgcccgaggtcgtggccgccaccctcgccctgccggtgcggacgctgatcgccgac
ggcgaggccatcgcgctgcggcccgacggcagaccggaccgcttccaggtgacggcgtcg
cggttcgggtcccggggcacgcgggacgccgcgacgcagccgctgtcggtgttcttcttc
gacgtgctgcacgtcgacggcaccgacctcctcgacgcgcccgtcaccgagcggttggag
gtgctcgactcgatcgtccccgcgtcccagcgggtggaccggctcgccaccgccgacgcg
ggagcggccgcggagttcctggcggccacgctcgccgccggacacgaaggcgtgatggcg
aagtcgccgacctcgccgtacgaggcgggccgacgcggggcgggctggctgaaggtgaag
ccggtgcacacactcgacctggtggtgctcgccgtcgagtgggggtcgggccgacgcacg
ggcaagctctcgaacatccacctcggcgcgcgggacgaccggaccggcgggttcgtgatg
ctgggcaagacgttcaagggcatgaccgacgagatgctggcctggcagacggagcggttc
ctcgggttggccgacggtccgacggacgggtacgtggtcacggtccggcccgagcaggtc
gtggagatcgcgctggacggggtgcaggggtccacccgctacccggccggaatggcgctg
cggttcgcccgcgtcgtccgctaccgcgacgacaagcgcccggacgaggccgacaccgtg
gagacggtgcgcgcgctctacgagcgctga
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