Mycobacterium seoulense: MSEO_28950
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Entry
MSEO_28950 CDS
T07134
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mseo
Mycobacterium seoulense
Pathway
mseo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSEO_28950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mseo03400
]
MSEO_28950
Enzymes [BR:
mseo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MSEO_28950
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSEO_28950
DNA repair and recombination proteins [BR:
mseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSEO_28950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
zf-TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BBY02396
UniProt:
A0A7I7P0J8
LinkDB
All DBs
Position
complement(3154479..3155342)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLTIGRVDVGALSVLKTFDPPPTALHGRPVTGAQRWGKYLG
LQAGELFLITHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGAPGEAPGFDLTEAGTQK
RLAVWLVDDPQLVPGIAALGPDALELSADDLAGLLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLTDEQLTTLHDAMVSVLRDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaggtcgaagcgctggccgaccatctacgccgccatgccgtcggc
ttgacgatcggtcgcgtcgatgtcggcgcgctgtccgtgctgaaaaccttcgacccgccg
cccaccgcgctgcacggccgacccgtgaccggggcccagcgctggggcaagtacctcggg
ctgcaggcgggagagctgttcctgatcacccacctgtcgcgggcgggctggctgcgctgg
tccgacaagctggccgcggcgccgctgcggccgggcaagggcccgatcgcgctgcgggtg
cacctcggcgcgcccggcgaggcgccgggcttcgacctcaccgaggccggcacccagaag
cggctggccgtgtggctcgtcgacgatccgcaactggtgcccgggatcgccgccctcggc
cccgacgccctcgagctcagcgccgacgatctcgccggactgctggccggcaataccggg
cggatcaagacggtcatcaccgaccagaaagtgatcgccggcatcggcaacgcctacagc
gacgagatcctgcacgtggccaagatctcgccgttcgccaccgcgggcaagctcaccgac
gagcagctcaccaccctgcacgacgcgatggtgtccgtcctgcgggacgccgtgagccga
tccgtgggccagggggcggccacgctcaagggcgagaagcgctccggactgcgggtgcat
gcgcgcaccggtctgccctgcccggtgtgcggggacaccgtgcgcgaagtttccttcgcc
gacaagtcttttcagtactgcccgacgtgccagaccggtggcaaggtgctggccgaccgg
cggatgtcgcggctgctcaagtag
DBGET
integrated database retrieval system
