Manduca sexta (tobacco hornworm): 115440385
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Entry
115440385 CDS
T07401
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115440385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115440385
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115440385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
ANAPC4_WD40
WD40
DUF6402
Motif
Other DBs
NCBI-GeneID:
115440385
NCBI-ProteinID:
XP_030020522
LinkDB
All DBs
Position
12:6966916..6990081
Genome browser
AA seq
1785 aa
AA seq
DB search
MDVQYGPNAVDEPNLLYKLQHKIKVFETQNPLQNRGYNLVASSSKYGILFVAVPNGLLTA
YYLNQVIDKECEPQHTTTKLQEMPTHIGVNCTQELLAVTGGQLICVFKVTDFQNQNTSPS
AIIKTEASPSTFVSSMQWNPCNPDSLALAMYDGTLIISQVSTNQLKKVQSKARCICWSPK
GKQLVTGNSDGTLCQYLPELTVAKTVVAPNLFSGCSTEAMAIHWISTFQFAVVYKNATDN
SRPALTIVHAGKTGQPTCHNYEDICFSQGSHRPWFYYLQGIAQWNLILASSSNSMEIATL
SSPDGASWMQWCQPDEARPELPLTDKKLENYPVGVCIDTCAIQQLPWGENEVLPYMPRLH
VLSQSGLLTIFNIVNLNKSAAQLCTPQQQLALPAAAMTSIVPSDVPPKPQPTPAPAPAPV
PIQKPQPLPAQAQPIQIPSVPKTSPFMPSMNNASQPAPQPQISAANKATAPFKQAVEQKE
TKPVLAQSQPQPLPQAQQQPQPAVPQAKPLPKAQQPPQMQENAALKAEQEKINKEKANQE
LKNMLVKEVNDFQMELYKFMVKTRETQAKLQQDIDAINLNIEPNSLDTEQLRKECSLDEL
RGTIAQFKLELVRTCAIMAEARTHAEVKDMEQWTQVDPLTIKRIASVKKLAYYVQNQLEQ
TRQALDYKWNEMESKDNYKSGSRMVRPRLDEVYQLLVRQQEILSRQQAVLRTLRNTATEC
DVTPVFKSTSILRSTPFRNKDPLSKLTKNILNMSIEPQTKKPLLTAQKIDALRDLLANHK
PIKIKPVNVELRQHLATMKLNYERSMREKEAVVTVKVKQEHVEAPKFEPKFVPAQPKVKL
EVKPEPVIQMPASGAAFTPVANVKPAAPAFGNVARTLFNDVPKPEPPKPVIQPTIPVANP
QPFKVQSHGFAPLNTASASAATKSVLKDLLQNKSQANLEAKNDANTFMGQKICSPTSFVA
PPIATTAPVILKDKQLSTSSNVFPKFQPQAFIPESKPQMSLIPKSNETDEFEAAASTKPF
EAKNTNLFGSTANVPDVLKSHNQEITKVESKPILKIPEKVIEISKENVPKKDVPKLTPTA
DKKDVPRILSSQSVNIKPPVSIATSLSTSSNESQKTEIKEVNAEVPKPAEKSELKVTSNA
SSIFANANITIPTAPKFQPAVIKPIMPTPQLAAKSESVAPPEPKLTEDSQPKAQESEVTT
TVSSSSIFAAAATSQSKTTAPTGSIFNSSTPLTTPSAFSSQGSIFGASTGSSSVFGSDTS
KPSIFSTPSSTASSIFGTAKTQAGSIFAPTTTEAPTAAAVFGTATTTQSAFSSTSSVFGT
AASAPSSVFSGSSSIFGTAATTTQSSLFGTPATSSFATTTTSSIFGSVTTTTQSIFGATP
ATQASVFGSTGQTSVFGSAPTTQSSLFSTTGQTGSVFGAPTSTTQPSVFGTPTSTTQPSV
FGTPTSTTQPSVFGTPTSTAQPSVFGTPTSSAQPSVFGTPASTTQPSVFGTPTPSTQASI
FGTPTQTTQTSVFGAPAATTAQSGSLFGVPEGNLFASASISTTSAPSQGGSIFGGSTSGS
VFGSSGTSVFGSTTFGQPNPTAAAIFGGATSGQKPATNFWSGGGATSGGGFGSSTFGQQS
TTQASSIFGSGSGGSFSAPQPAGTTAFSSPQQGSAFGAAPSFGGSPVFGSKPVFGQSGGF
SSPTGGGFGSFGGFNKSPSSGFGGPASFGGAPTFGNSAFGNTSPGKVFGGSPAPAFGSPT
QSNARFESLATQNTLTFGNLAQQSGQPAPQPPSFNTSPSFTGWRG
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcagtatggtcccaatgcagttgatgaaccgaacctactgtataagctacaa
cataaaataaaagtgtttgagacacaaaatccattacaaaaccgtggatataatttggtc
gcatcaagcagcaaatatggcattctttttgttgctgttcctaatggattacttacagca
tattacctgaaccaagtgattgacaaggaatgtgagccacaacatactaccacaaagctt
caagaaatgcctacccatataggagtcaactgcactcaagaactcttggctgtcacaggt
ggccaactgatttgtgtttttaaagtcactgattttcaaaatcagaacacctcaccatca
gctattatcaaaacggaagcaagtccttccacatttgtttcttctatgcaatggaatccg
tgcaatcctgactcgcttgccctagccatgtatgacggaacacttatcatctctcaagtg
agcaccaaccaactgaaaaaagttcaatctaaagcaaggtgtatatgctggagcccaaaa
ggcaagcagttggttacaggcaacagtgatggtacactttgtcagtatttaccagaattg
actgtagcgaagacggtggtagcaccaaatctcttctcaggatgctccactgaagccatg
gctatacattggatatccaccttccagtttgccgtagtctataagaatgctacggacaat
agccgtccagctctaaccattgtgcatgctggaaaaactggtcaaccaacatgtcacaat
tacgaagatatttgcttcagtcaggggtcacatagaccttggttctactatctacaaggg
attgcacagtggaatcttatactggcctcatcatcgaacagtatggaaatagcgacgctt
agctcacccgatggtgcaagttggatgcagtggtgtcagccagatgaagccaggccagag
ctgccattgactgataaaaagttggaaaattaccctgttggagtatgcattgatacttgt
gcaatacagcaattaccctggggtgaaaacgaagtcttgccgtacatgccacggctacac
gtgctgtctcaatccggcctcctcactatattcaatatagtgaacctcaataaaagcgca
gcacaactgtgcactccgcagcaacaactggcgttaccagctgccgctatgactagcatt
gtacccagtgatgtgccaccaaaaccccaaccgacgcctgcgcctgctccggcgcccgtc
ccgatacagaagccgcaaccattgcctgcccaagcgcagcctatacaaataccgtcagta
ccaaagacaagtccgttcatgccatcaatgaataacgcctcacaaccggcaccacaaccg
caaatttcagcagcaaacaaagcaactgcgccatttaaacaagctgtggaacaaaaagaa
acgaagccggtattagctcaatctcaaccgcaacctctgcctcaggcccagcagcaaccg
caaccagctgtgccacaggcaaaaccactacccaaggctcagcaaccgccacaaatgcaa
gaaaatgctgctttgaaagcggaacaagagaaaattaacaaagagaaagctaaccaggaa
ttgaaaaatatgctagtgaaagaagtgaatgattttcaaatggaattgtacaagtttatg
gtgaagactcgtgagactcaggcgaagcttcaacaagacatagatgccattaacttaaac
atcgagcctaattccctggacacggaacagctaaggaaagagtgttcactggacgaactg
agaggaaccatagctcaattcaaattggaattggtgaggacctgcgctatcatggcagag
gcgcgtacgcatgccgaagtaaaggatatggaacaatggacgcaagtggaccccctgacg
atcaaacgcattgcttccgtgaagaaattggcgtactacgtgcaaaaccaactggaacaa
actcgacaagcacttgactacaaatggaacgaaatggaatctaaggataattacaaatca
gggtcccgcatggtgcgccccaggttggacgaagtgtatcaactgttagtgagacagcaa
gagatactcagccgacagcaggcggtccttcgaacccttcggaacaccgccacggagtgt
gacgtcacacccgtcttcaaatccacctccatattgaggagcacgcctttcagaaataaa
gatcccctgtcaaagttaaccaaaaacattttgaacatgagtattgagcctcagacgaaa
aagcctctattgacggcgcaaaaaatcgacgcactcagagacttgttagcaaaccacaag
ccgataaaaataaaaccagtgaatgttgaattgagacagcatttggcaacaatgaagttg
aattatgaaaggagtatgcgagagaaagaagccgtagtaactgtgaaggtgaaacaagag
catgttgaagcacccaagtttgaaccaaagtttgtgcccgctcagcctaaagtaaagttg
gaagtgaagccagagcctgttattcaaatgccggcaagtggcgcggcattcacaccggtg
gcgaacgtgaaacccgctgcgcccgcgttcggtaacgttgctagaacgctgtttaatgat
gtaccgaaacccgaaccgccaaagcctgtaatccaaccaactataccagtggcaaaccca
caaccattcaaggtgcaatcccacggtttcgccccgcttaacacagcgtctgcctcggcg
gccaccaaaagcgtattaaaagatctactacaaaacaaatctcaagctaatttagaagcc
aaaaacgacgccaatacctttatgggacaaaaaatatgctcgcctacatcatttgttgcg
ccgccaatagctactacagcccctgtgatattaaaagacaaacaattgtctacctcaagc
aatgtctttcccaaattccaaccacaagcattcataccagaatcaaaacctcaaatgtcg
ctaattccaaagtcaaatgaaacggatgaattcgaagcagcagcaagcacgaaacctttt
gaagccaaaaatacaaacttattcggatcgactgcgaatgtacctgacgttttgaaatct
cacaaccaggaaataacgaaagttgaaagtaaaccaattttaaaaatacctgaaaaagtt
atagagatatcaaaggagaatgtcccaaaaaaggatgtgcctaaattaactccaacggcg
gataaaaaggacgttccaaggatcttgtcgtcgcaaagtgtaaatataaagccacctgta
tctattgctacaagtctttcgacttcatcaaatgaatctcaaaagacagaaataaaagag
gtaaatgcggaagttccaaaaccagctgaaaagtctgaattgaaggtaacatcaaatgct
tcgtcaatttttgcaaatgccaacatcacaattcccacagctcccaaatttcagccagcc
gttattaagcctataatgccaacgccccaacttgctgcaaagtctgagtctgtagcacct
cctgaacccaaactcactgaagattcacaacctaaagcccaagagagcgaagtgacaaca
accgtttcttcatcatctatattcgcagcagctgcaacgtcgcaatcaaaaacgacagca
cccactggttctatattcaattcatctacccctttaacaacgccaagcgcgttcagttca
caaggatctatatttggtgcttcaaccggttcaagttccgtttttggaagtgacacatca
aaaccatctatattcagtacgccaagctccacagcctcgtctatatttggtacagctaaa
acacaagctgggtctatttttgcaccaactactacagaggcaccgacagcagcagcggta
tttggaacagcgactacaactcagtcggcctttagttcaaccagttcagtgttcggtaca
gctgctagtgctccatcttcggtgttcagtggctctagttcgatattcggaacggcagcg
actacaacacaatcgtctttattcggtacccctgcaacatcatcgtttgcaactactaca
acgtcatctatattcggtagtgtaacaacaacgacgcaaagtatatttggcgctacaccg
gcaacgcaggcttctgtgtttggatctacgggacagacttcagtatttgggtctgcgccg
actactcagtcttcgctgtttagtacaactggtcaaacaggttctgtgttcggagctccg
acgtcaaccactcagccgtctgtgtttggtacaccaacatcgactacacaaccttctgta
tttggtacacctacttcgaccacacaaccttccgtgtttggtaccccaacttcgactgca
caaccctctgtgtttggtacaccaacttcgtcagcccaaccttctgtatttggcactcca
gcgtcaacaactcagccgtctgtgtttgggacaccaacgccatctacacaagcgtcgatc
ttcggaacgccgacgcagacaacacaaacgtcggtgtttggcgccccggcagctacaact
gcgcaaagtggatcattattcggtgtacctgaaggcaatttattcgcgtcagcaagcatt
tctacaactagcgctccatctcagggtggaagcatttttggcgggagtacatcaggatcg
gtgttcggcagtagcggcactagcgtgttcggtagcactacattcgggcagccgaatccg
acggcggccgccatattcggtggcgcgacatctggtcaaaaaccagcgactaacttctgg
tctggaggtggcgccaccagtggaggcggtttcggttcatccacttttggccaacaaagt
acgacgcaagcgtcgtctatcttcggcagcgggtcgggtggtagtttcagcgcaccgcag
cccgccggcaccacagccttcagcagtccacaacaaggatccgcgttcggagcagctccg
tcgttcggcggatcgcccgttttcggctcgaaacctgtctttggacaatctggaggtttc
agttctccgacgggcggtggcttcggctctttcggcggtttcaacaagagccccagtagc
ggtttcggtggtccagcttccttcggcggcgctcctacgttcggcaattctgcttttggc
aacacctcccctggcaaggtgtttggaggaagtcctgcaccagcattcgggtcgccgaca
cagtcgaacgcaaggtttgaaagcctagcgactcagaacacgctcacgtttggtaacttg
gcgcagcagtccggccaaccagcaccgcagccgcccagttttaacacgtcaccatctttc
actggttggcgcggctaa
DBGET
integrated database retrieval system
