Manduca sexta (tobacco hornworm): 115448647
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Entry
115448647 CDS
T07401
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115448647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msex03400
]
115448647
Enzymes [BR:
msex01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115448647
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115448647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
DNA_ligase_IV
LIG3_BRCT
PTCB-BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
115448647
NCBI-ProteinID:
XP_037298542
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All DBs
Position
25:12746075..12757168
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AA seq
884 aa
AA seq
DB search
MVTPANTVLFEEFCNTLECIFKKKQKRDREKILVEFICDLKTRIRQTEGEKNTTLYPVIR
LLVPKLERERPPYNMKERKLGELLVKILPLRKDSQEAKKLLNDRSVLRDRDFASEVYFVV
KKRMNERTGNLTIKDINDILDKIATAEVGNKGPILDQAFSSALRNLNADQLKWFIRIILK
NLKLGLSDKGILACFHPDAPEYYDNCHDITQVCLDLDDACYRPENMGIKLLSPVSPMLCE
RLDVTDVCYLDPDRTYQVEEKFDGERSQIHMKDGKFIYFTRRAHVVKIYGDNYEEGLLTR
YLKGCFKSDVTSFILDGEMMLWHKQDQCFGPKGLPYDVKKITEKSAYRPCFCAYDLLYLN
GKSLVGPAENGGTPLNKRLEQLDSLFTDIPGVIQHSKRKIVEKRTDILEELNTSMLNQEE
GIVVKDVQSYYRPGHRNLGWFKLKMEYTKGAMPDLDLVIIGADRSGNKRQGQVKSFFVAC
LDNSQSEKRWLCVGCVASGLKSVDRDKVVTHLERHWHRTAFTPPQGNLIFNKARPDYWIA
PEHSIVLEICASELTKTSTFATDYTLRFSRIIRTREDKPIDDTMTLEEFCRPTLNQGHVV
KLATKRINQDQLANNEDKIPKKRVVKEKQVAEPYRVASHGDVKVTSNALAGRKLCILSDD
EDCGRTELIKIVETHGGKVVADYGADTWCCVAGRSTARVRAAVTSRSVDVARAAWLRALP
PAAAPLPPHPLALLAAAPATALALARDYDAYGDSYTQPTDRPTLDKCFTKISIDEPDVYL
TAQEMLELDKELFGNTNPYSFLRPCFMRLVNCKTVNEIYSKMFGATVCDASARNVTHVVV
GKTTGNDEINNLREMYKDALIVSEDWLEECAKNEMLIPEDTYTL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggtcacacctgcaaatactgtattattcgaagaattttgtaatactttggagtgcata
tttaagaaaaaacaaaaaagggacagagaaaaaatattagttgagttcatttgtgacctt
aaaacaagaattcgtcaaactgaaggcgaaaagaatactactttgtatccagttatcaga
ttacttgtgccaaaattagaaagggaaagacctccttataatatgaaagaaagaaagcta
ggtgaattgttagtaaaaatactgcctttacgcaaagattcacaagaagctaagaaatta
ttaaacgataggtcagttttacgtgaccgtgatttcgccagcgaagtttatttcgttgta
aaaaaacgaatgaatgaaagaactggtaatttaacaataaaagatattaacgacatactt
gataaaatagcaacggctgaagtggggaataaaggacctattcttgatcaagcatttagc
tccgccctaagaaatttaaacgctgaccaactaaaatggtttataagaataattttgaaa
aatttaaagcttggacttagtgataaaggcatccttgcttgttttcatccagatgcccca
gaatattatgataactgtcatgatatcacccaggtatgtctggatttagacgacgcctgc
tacaggcccgagaatatgggtataaagttattgagtccagtgagtccaatgttatgtgaa
cgactcgacgttacggatgtgtgttatttggatcccgacaggacatatcaagtggaagag
aaatttgatggggagcggtctcagattcatatgaaagatggaaaatttatttattttacg
agaagagcacatgtagtcaaaatatacggagacaattacgaagaaggccttctgacacgt
tatttgaaaggctgttttaaaagcgatgtcactagtttcattttagacggcgaaatgatg
ctctggcataaacaagaccaatgttttggtcctaaaggtttgccttacgacgtgaagaaa
attacagaaaaatcagcatatagaccatgtttctgtgcttacgatttactttatttaaac
ggtaaatcgctcgtcggacctgcggaaaacggtggcacacctttaaacaagcgactcgaa
caactagactccctgttcacggacattcccggtgtcattcaacacagtaaaaggaaaatt
gttgaaaaacgaactgatatattggaggagcttaacacgtctatgttaaaccaagaagaa
ggaatcgttgttaaagatgtccaatcatactatagacccggacatcgcaatcttggatgg
ttcaagttgaaaatggagtacacaaaaggggctatgcctgatctggatttggtaatcata
ggggctgaccgttcaggcaataaaaggcaaggacaagtaaagagctttttcgtagcttgt
cttgataactcacaatcagagaagcgctggctgtgcgtcggctgcgtggcctcagggttg
aaaagtgtcgacagggacaaggtggtgacgcacctggagagacactggcatcgcaccgcc
ttcaccccaccacagggtaacctcatattcaacaaggccagaccggattactggattgca
ccagaacattccatcgttttagagatttgcgcatctgaactgacgaaaacgtcaacattc
gccaccgactacacgctgcggttctcgcgcatcatacggacgcgcgaagacaagcccatc
gacgataccatgaccttagaggagttttgccgcccgaccttgaaccagggtcacgtagtt
aaactagctacgaaaaggatcaatcaagaccaactcgcaaataacgaagataaaattccc
aaaaaacgtgttgtgaaagaaaagcaagttgcggaaccatacagggtcgcgtctcacggg
gatgttaaagtcacatctaacgcattagcaggccggaaactgtgcatactgtctgatgac
gaggactgtgggaggaccgagttgataaaaatcgtggagacacatggcggaaaagttgtg
gctgattatggtgcggacacgtggtgctgcgtggcggggcggagcacggcgcgcgtgcgc
gcggcggtgacgtcacgcagcgtggacgtggcgcgcgcggcgtggctgcgcgccctgccg
cccgccgccgcgccgctgccgccgcacccgctggccctgctcgccgccgcgcccgccacc
gcgctcgcactggcgagggactacgacgcgtacggagacagctacacgcaacccactgat
cgacctacactcgacaaatgtttcaccaaaatcagtatagacgaaccagatgtttacctc
actgcacaagagatgctagagctagacaaggaattattcggtaatactaatccttattcg
tttttgcgaccgtgtttcatgcgtcttgtcaactgcaaaactgtaaatgagatatacagt
aaaatgttcggagcgactgtatgcgatgcttctgccagaaatgtgacacacgttgttgta
ggtaaaacaactggtaacgacgaaataaataacttgcgagagatgtataaagatgctttg
atagtatctgaagattggttggaagagtgcgcgaaaaatgagatgttaatcccagaagat
acatatacattgtaa
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