Manduca sexta (tobacco hornworm): 115449905
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Entry
115449905 CDS
T07401
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msex03400
]
115449905
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
115449905
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
RNA_helicase
AAA_25
AAA_21
AAA_27
Sec10_N
Motif
Other DBs
NCBI-GeneID:
115449905
NCBI-ProteinID:
XP_037299564
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All DBs
Position
5:complement(5154833..5175112)
Genome browser
AA seq
1056 aa
AA seq
DB search
MSQLNEKISEVYNDGKVKAGCIYRIALQNFLTYKQVVLYPSTSLNLIIGPNGTGKSTFVC
AIILGLCGKPNVSGRGLKVAQYVRTGCQDAVIEIELYQKPRQRNVIIRRMFGLNDATTWT
IDHKRVTEKQVQELIASLNIQVDNLCQMLPQHRVQDFSKLDQQQLLRSTLSAVGGQESVS
QLDQLIAYRTQQRGLSSKQQNNAQVLEEKIRLNDRLKIVIEAMKQRKEIEKQIEICEKKK
LWIEYQDLREKVKECTQDKKNAQNIVNTHKAKAEPLEKLIAAARTGIQRLEQQRLGANRE
INTLKDKAKEIIDAMKNLEYKMKDIDTSLQEKIERHQNRRSELAEARIKLDKLKTDRTAL
VEKVGDETRIKMEIAELRKPIAKINSQMDALKKQKLVIQCDLDNNVIPQIRMCQNKLRQL
EDVGEKRLDTLRTYNEDSYNAVQWLRQNRDMFQHPVYEPMMLEINFTDPKFARYLNSTVP
DRDLVAFTFESTQDMNLFLQKVRLEGGLKRVNAICSPGGRGNYQTDNIQQLSYLGFYTYL
VDTITAPDAIIRYLCKQYGIHRIPIGNQHTYNNSGKVPPHINYFFTENHRFTIRRSAYSG
ATSSSTIEIRPPTLLANTVDAEQITNWNNQVEKHRRTEHTHKEKINDIDSKVSNLEAHLN
ELNTKLKKINEGVEKVRTLGSEIRLQAKKVEDIENEPELDIQKEKVECRKRQRDCIATQC
KLQEELCTTVVTLHTTALNGEMWKEKLQFSRNAIVDQETELRELKSELRNAEATLENIDN
TLTRAMNSAKEKLTEAKRSCNNKLPQNPDFPYKKEFESLPSTLNGLQEHCYELQTRRDCM
ENGDEQVIQEYEEREKEIADLKSQVASSSDMNKDLDKKMKQIQSKWLPPLEKLLRDINKG
FGHMFEKMGCAGEVKLVKGGSEEDFDKYGISIMVRFRAEEQLQQLTRHTQSGGERSLATA
IYLMALQRLTTVPFRCVDEINQGMDRINERKMLQLLVKVTTEIDNSQYFLLTPKLLTNLE
YNPKIMVHTVMNGKHIMPYDKWNYDKFISRARHYKA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagttaaatgaaaaaatatcggaagtatataacgacggcaaagtaaaagccggt
tgcatatacagaatagctttacaaaattttctaacgtacaaacaagttgtgttatatccg
agtacatcacttaacttaattattggaccgaacggaacaggcaagtctacgtttgtgtgt
gccattatacttggtttatgtggaaaacctaatgtcagcggtagaggactaaaggtcgcc
caatatgtaaggacgggatgtcaagacgcggttatagagatagaattgtaccagaagccc
aggcagcgtaatgtgatcatcaggaggatgttcggcttgaacgatgccacaacatggacc
atagaccacaagagagtcacagagaagcaagtgcaagagctcatagcttctttgaacatt
caggtggacaacctatgccaaatgctgccgcagcatcgagtccaggacttctcgaagctg
gaccagcaacagttgctgcggagcacgctgtccgctgtgggtgggcaggagtccgtcagt
cagttagaccagctgatagcctacaggacgcagcagcgaggactgtcgtcaaaacagcag
aataatgcgcaagtgctagaagagaagatacggcttaatgacagattaaagatagtaata
gaagcgatgaaacaacgaaaagagatagagaagcagatagagatatgcgaaaagaagaag
ttatggatagagtatcaagacttgagggagaaagtgaaagagtgtactcaagacaagaag
aacgcccagaacatagtcaacacgcataaggccaaagcagagccgctggagaaacttata
gcagctgccaggacaggaatacagaggctggaacaacagaggcttggagcgaatagagaa
attaacacactgaaagacaaagcgaaagagataatagacgctatgaagaacctggaatac
aagatgaaggacatagacacgtcgctacaagagaagatagagcggcatcagaacaggcgc
agtgagctggccgaggcgaggatcaaactggacaagctcaagactgacaggactgcgcta
gtggagaaagtgggagatgaaactcgtataaagatggagatagctgagctacgcaagccg
atagcgaagatcaactcgcagatggacgcgttgaaaaaacagaagctggtgattcagtgc
gatctggacaataacgtcataccgcagataaggatgtgccagaacaagttgcgtcaactg
gaggacgtcggcgagaagcggttggacacactgcgcacctacaacgaggacagttacaac
gcagtgcagtggctccggcagaacagggacatgttccaacatccagtgtacgagcccatg
atgcttgagataaacttcacggatccgaaattcgcccgttacctgaactctacagtcccc
gaccgggacctggtcgccttcacgttcgagtccacgcaggatatgaacctgttcctgcag
aaagtgaggctcgaaggcgggctgaagagggtgaacgcgatctgcagccccggaggcagg
gggaattaccaaacggataatatacagcaactaagttacctgggtttctacacgtacctg
gtggacaccatcacggcgccggacgccatcatccgttacctgtgcaaacagtacggcata
cacaggataccgatcggcaaccagcacacctacaacaacagcggcaaggtgccgccgcac
atcaactacttctttactgagaaccacagattcacaatacgcaggtcggcgtacagcggc
gccacatccagctccaccatcgagatacgaccaccgacgctgctcgccaacaccgtggac
gcagaacagatcaccaactggaacaatcaggtagaaaaacaccgacgtacagaacacacg
cacaaggaaaaaatcaacgacatagactctaaagtatcgaatctagaagcacatctcaac
gagttgaatactaaacttaagaaaatcaacgagggcgtggaaaaggtgagaacgttgggc
tccgagattcgtctgcaagcgaagaaagtggaggacattgagaatgagccggagctggac
atccagaaggagaaggtcgagtgccgcaagaggcagcgggactgcatcgccacgcagtgc
aagttacaggaggaattgtgcaccactgtcgtcacactgcacaccaccgcgctcaatgga
gagatgtggaaggaaaaattacaattcagtcgaaacgccatcgtggatcaggagaccgag
ttgcgagagcttaagagcgaattaagaaacgctgaggcaacactggaaaacatagacaac
acgctgacgcgagccatgaacagcgccaaagagaagttgacggaagcgaaacgttcgtgt
aataacaaactgccgcagaatcccgactttccttacaagaaggagtttgaatctctcccc
tccactcttaacgggctgcaggagcattgttacgagttgcagacacggagggattgtatg
gagaatggagatgaacaggtcattcaagagtacgaggaaagggagaaagagatagcagat
ttgaaaagtcaagtcgccagttccagcgacatgaacaaggatttagataagaagatgaag
caaatacaatcaaaatggctgccgccgctagagaagctcctgagggacataaacaagggt
ttcggtcatatgttcgagaaaatgggatgcgcaggagaagtgaaactcgtaaaaggaggc
agcgaggaggatttcgacaagtacggcatatcgatcatggttcgattccgggcggaggaa
cagctgcaacagttgactcggcacacgcagtcgggaggcgagaggtcgctcgccacggcg
atatatctcatggcgttgcagaggcttaccaccgtgccgttcagatgtgtagacgagatc
aatcaaggcatggacagaataaacgaaaggaaaatgctgcagctgctggtgaaagtgacc
accgagatcgacaactcacagtacttcttgttaacgccaaagctgctcacaaacctggag
tacaacccgaagattatggtgcacactgttatgaacgggaaacacataatgccctacgac
aaatggaattatgacaaatttatatctcgcgcgaggcattacaaggcttaa
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