Manduca sexta (tobacco hornworm): 115452169
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Entry
115452169 CDS
T07401
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115452169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115452169
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115452169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_22
AAA_5
TIP49
AAA_33
AAA_14
Vps4_C
AAA_28
AAA_25
nSTAND3
RNA_helicase
Mg_chelatase
AAA_17
AAA_18
AAA_2
NACHT
IstB_IS21
ABC_tran
ATPase
TsaE
AAA_7
AAA_3
Parvo_NS1
Zeta_toxin
Rad17
Sigma54_activ_2
AAA_11
Zot
Motif
Other DBs
NCBI-GeneID:
115452169
NCBI-ProteinID:
XP_030036495
LinkDB
All DBs
Position
11:10807441..10810437
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AA seq
858 aa
AA seq
DB search
MKKTHQTRQKTMSDPMIVTRVKNYLAENVDKTFVDVSQMARSLKERHREYNNRSDSAFCQ
MVESAYKVVLQSYGLDGASTSDGSEEESDLELLDENASALNERLLAMYKMQDKKRPAANR
RNTDKSGEPIDILSSDEDGSAAPKLPKISDQITITPHIPARTNSTAIESALKQQNQPVDK
KRKPESNKNPVPKKKYDVGTSKHVKVSFEDIGGLSDIITQICDLILHMKHPEVYAKLGIK
APRGALLHGPPGTGKTLLAQAIAGKLQLPLVSVTGTELVGGVSGESEERIRELFERAVSV
SPSVLFIDEIDAVCGNRVHAQKDMEKRMVAQLLASLDSLSDNDAAVLVLAATNNPDALDP
ALRRAGRLEQEITLGIPSLKSRKEILEILCRNITMDEDVNMNILAQITPGFVGADLQALV
NKASTYAVKRIFTEIRANELAQKVKAQAKPVEELAPVISNGEKESEEPASNEPTESVVNA
VEGSTPIVVAEPVPEKLESEVNHVEESVKPLSPLDEVLELLNVMPYSTEKLSGLAIRLED
FLKALKTTKPCAVREGIVTVPDVSWDDVGSLNQVRKDLQLAVLAPVKYPEQLSKLGLSAP
SGVLLCGPPGCGKTLLAKAVANEAGVNFISVKGPELLNMYVGESERAVRTCFRRARNSAP
CVIFFDEFDALCPRRTSQDNNGAARVVNQLLTEMDGIESREGVFVLAASNRPDIIDPAVL
RPGRLDRVMYVGMPAREDRFDILQKLTKGGTKPQLGPDVDLQVIAGLTEGYTGADLAGLV
RAAATNTLTNHIANGTLEGEIFVTFEDFRAALSKCKPSVSSKEQLHYEKLRLKYASGADD
KDMEMETEPLTEESMDTV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacacatcaaacgcgacaaaagactatgagtgacccgatgatcgtgacgcgc
gtgaaaaattacttagcggaaaatgtggacaagacgttcgttgatgtgagccaaatggcg
cgttctctcaaagagcggcaccgcgagtacaacaacaggagcgacagtgccttctgtcag
atggtggagagtgcatacaaagtggttttacaaagctacgggctcgacggtgcgtccacg
tcagacggttccgaagaagagtccgacttggagttgttggacgaaaacgccagcgcattg
aacgagcggcttctcgccatgtacaaaatgcaggacaaaaaacgacccgcagctaatcgt
cgcaatacagataagtctggtgagcccatagacatacttagtagcgacgaagacggtagc
gcggcgcccaaactacccaaaataagcgatcaaataacaatcaccccccacataccggcc
agaacaaatagcacggccatcgagagtgcactaaaacaacaaaaccaaccggttgacaag
aaacggaagcctgaatccaataaaaatcctgtgcccaagaaaaagtatgatgttggcaca
tcaaaacatgttaaggtatcgtttgaggacattggtgggctgtctgacattataacacag
atatgtgacctaattttacacatgaaacacccagaagtgtatgccaagttgggtataaaa
gcccccagaggggcattattacatggtccaccgggcacagggaaaacattacttgcacag
gctattgcaggtaaattacaattacctcttgtgtctgtgacaggcacagagcttgtgggt
ggagtgtctggagagtcggaagaaagaatcagagagttatttgagcgagctgtatctgta
tctccaagtgttttattcattgatgagatagatgctgtatgtggtaatagagtccatgct
caaaaagacatggagaagagaatggtagctcaactattggctagcttagactcgcttagt
gataatgatgctgcagtacttgtgctagctgcaactaacaaccctgatgccttagaccct
gcattgagaagagcagggcgtcttgaacaagaaataacattgggtataccatcattaaaa
tcaaggaaagagattttagaaattctttgtagaaacattacaatggatgaagatgttaac
atgaatattttagcacaaataacaccaggatttgtaggagctgacctgcaggctttagtg
aataaagccagcacttacgcagtcaagagaatctttaccgaaatcagagcaaatgaattg
gcacaaaaagttaaggcacaggctaaacctgttgaagaattagcccctgtaatatcaaat
ggtgaaaaagaaagtgaagagccggccagcaatgagcccactgagtctgtagttaatgca
gtagagggttcgactccaattgttgttgcagaaccagtaccagaaaaattggaatctgaa
gtaaaccatgttgaagaatctgtaaaacccttaagccctctagatgaggttttagaattg
ctgaatgtgatgccttattccacagaaaagttatcaggccttgccatcagactagaagac
ttcctcaaagctttaaaaacaacaaaaccttgtgcagtgagagaaggtattgtaacagtc
ccggatgtaagttgggatgatgttggatctttgaaccaagtaagaaaagacttacagcta
gcagtgttggctccagtgaaatatccggaacaattgagtaaacttggactctctgcacca
agcggagtgttactttgtggacctccaggatgtggtaaaacattactggcgaaggctgta
gctaacgaggcgggagtaaattttatatctgttaaaggtcctgaactactcaacatgtat
gttggtgagagtgagagagcagtgcgtacgtgtttcagacgcgctcgaaattccgcaccc
tgtgtgatattcttcgacgaattcgacgctctatgtccgagacgtacgtcacaagataac
aacggtgctgccagagtggtgaaccagttgttgaccgaaatggacggtatagaaagccgt
gaaggagtctttgtgttagcagcttcaaacaggccagatattattgacccagcagtgcta
cgaccgggacgtctcgaccgcgtcatgtacgttggaatgccggcgagagaagaccggttc
gacatcctccagaagctaaccaaaggtggtactaagccacaattaggacctgacgtggac
ctacaagtgattgcagggttaaccgaaggctatacgggggctgacctcgcaggactggtc
agagctgccgccactaatacattaacgaaccacatcgcaaatggaactcttgaaggcgaa
attttcgtaacattcgaagactttagagcagctctatcgaaatgcaagccttccgtttcg
tcgaaagagcagttgcactacgaaaaactgagattgaagtacgcatcgggtgccgacgac
aaagatatggaaatggagactgaaccactaaccgaagagtcaatggacactgtgtga
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