Manduca sexta (tobacco hornworm): 115454940
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Entry
115454940 CDS
T07401
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115454940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115454940
03036 Chromosome and associated proteins [BR:
msex03036
]
115454940
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115454940
Coactivators
SAGA/TFTC/STAGA complex
115454940
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115454940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
115454940
NCBI-ProteinID:
XP_030039501
LinkDB
All DBs
Position
27:597314..620488
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AA seq
893 aa
AA seq
DB search
MASAEFLEEALSSDVDEKAVNAIVGTLENQLVTSVPSVSQQNTIVNIISSQFPGLGSGSS
SMIPSQKCVADSSTTGVTSSIYSSGTTNPSVSCNNARPSTPSTFTPITLTGGVSSFNENI
QVIYTEAQSLSNPSSVTFPAQPLSNGSLGLPPSQCHIISTVVPSDKGVAMQPPLVLKQGS
GTGQVGMQPGMVTVPMTVNSSMPTSIPNVMTLNKPGAQNVVVTTQNLGSAQPAIIPNVQI
LNMRPGAPAVAAQKSVATVSPRVVIGTPQVVGTRAAAPGITLQTLQSLQPGQQGHLLLKT
ENGQYQLLRVGPAPAASTLTAPQPQTIRLSTVPAHPGVATVSTSVAQGPIPGQMPAAPVA
TPVVPASVGNVAPVTPPPQPPTVTTVKPLDNTKEKCRNFMANLLDLSSKEPPSVERNVRN
LIQELIDALVEPEEFCVRLERLLNASPQPCLIGFLKKSLPLLRQSLVNKELVIEGINAPP
PHVAFSTLPAPAQPVMPTTNVPMVGTAYNPFPLEEDGATLTPLLPPVLPLAPAPSLVSTA
KTINAMSMQPNMQPQKPPQKPGSTIAVLQNIPVHTKINVSKVSGGKSMTVNSKNTFPRAG
ASSAALSTVLTPGKSLLKEKEKKSQFSSQPYADDKMAGDDDINDVAAMGGVNLAEETQRI
LGSTEMIGTQIRSCKEEYLVPMSVMQARVKAAAQRHNLEEPSPEVAGLVSHAVHERLKNL
VEKLAAIAQHRIDLIVKTDSRYEVTQDVKGQLKFLEELDRVDKKRREDSEREMLLRAAKS
RSKTEDPEQAKLKAKAKEMQRAELEELRQREANLTALQAIGPRKKPRLDGPGGSAGDTAS
NGSSSGPGFVSTGRSQLALRTRLKRINHRDMVFLLEQERDTAHSPMLFRSYLK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcggagtttttagaggaagctttgtcctcagacgtcgacgagaaagctgta
aacgcgatcgtgggcacattagaaaaccagttggtcacatctgtgccatcggtgtcccaa
caaaacaccatagttaatataatttcctcacagttcccaggcttagggtcgggctcgagt
tctatgatacctagtcaaaagtgcgttgcagactcgtcgactactggtgttacgagtagt
atatattcgtcagggaccactaatccaagtgtttcgtgtaataatgcgcgtcctagtacg
ccaagtactttcacgccaataacgttgactggtggtgtatctagtttcaacgaaaacatc
caagtgatatatactgaggcgcagagtttaagcaaccctagctctgtgacgtttcccgct
cagccgctgtcgaacggttcgctggggttgccgccttcgcagtgccacataatcagcacg
gtggtgccatcggacaagggagtcgccatgcagccgccgctcgtgttaaagcagggcagc
ggcaccggccaggtgggcatgcaacccggtatggtaacggtgcccatgaccgtcaattcg
agcatgcccacctccatacctaatgtgatgacgctgaataaacccggcgcccagaatgtc
gtagtcaccacgcagaacttaggctcggcgcagcccgccatcatccccaatgttcaaatt
ctaaacatgaggccaggggcgccggcggtggccgctcagaagtcagtagcgacagtgtca
ccgcgggtggtcattggaacacctcaagttgtgggtacgagggcggcagcacctggcata
acgctgcaaactctgcaaagtctacaaccggggcagcagggtcatttgttgttaaagact
gaaaatggtcaataccagttgctgagagtgggtcccgcaccggcggccagcactctcacg
gcgccccagcctcagaccatccggctgtcgaccgtgccggcacacccgggagtggcgacg
gtgtcgacgagcgtggcgcaggggcccattccggggcagatgccggcggcgcctgtcgct
acgccggtggtacccgcatccgtgggcaacgtggcgcccgtcaccccgccgccgcagccg
cccactgtcactacagtaaaaccgttggacaacacaaaggagaaatgcagaaacttcatg
gcgaatttactggacctatccagcaaggagccgccgtcggtggagcgcaacgtgcggaac
ctcatacaagagctaatcgacgcgttagtggagcccgaggaattctgcgtgaggcttgag
aggctgctcaacgcatcgccgcagccgtgccttattgggtttctgaagaaaagtttgccg
ctactgcgtcaatcgctagtcaacaaagagcttgtgatcgagggcattaatgcgccacct
ccgcacgtggcgttctccactctgcctgcgcccgcgcagcctgtcatgcctaccacaaac
gtgccgatggtaggaacggcgtacaacccctttccgttggaggaggatggcgcgaccctc
acgcccctcctgccgcccgtgttgcccctcgcgccggcgccctccctcgtctctactgcc
aaaaccattaacgctatgtccatgcagcccaacatgcaaccgcagaagccgccacagaag
ccgggcagcaccatagccgtgttgcaaaacataccggtacacacaaagatcaatgtgagc
aaagtgagtggaggcaaatcgatgacggtgaacagcaagaacacgttccctcgggcgggg
gcgtcgtcggcggctctctccacagtcctcactcctggcaagtctctgctgaaggagaaa
gagaagaagtctcagttctcgtcgcagccgtacgcggacgacaagatggctggtgatgac
gacatcaatgacgtagcggccatgggtggcgtcaacttggccgaggagacgcagaggatt
ctgggctcaacggagatgatcggcacgcagattagatcatgcaaagaagaatacctggtg
ccgatgagcgtgatgcaggcgcgcgtgaaggcggcggcccagcggcacaaccttgaggag
ccgtcgccggaggtggccggactggtcagccacgcggtgcacgagcggctcaagaacctt
gtggagaagcttgctgcgatagcgcagcacaggatagaccttattgtcaagaccgactcg
aggtacgaggtgacgcaggacgtgaaagggcagctcaaattcctggaggagctggaccgg
gttgacaagaagcggcgcgaggattccgagcgggagatgttgctgcgcgcggccaagagt
cgctccaagactgaggaccccgagcaagccaagttgaaggcgaaggctaaggagatgcag
cgcgcggaactggaggagctgagacagcgcgaggcgaacttaacggcactgcaagcgatc
gggccgcggaagaagccccgactggacgggcccggcggcagcgccggcgacaccgcctcc
aacgggtccagctccggaccgggattcgtgagtacgggtcgcagccagctggccctccgc
acgcgtctcaaaaggatcaaccatcgagacatggttttcctcctcgagcaagagagggac
accgcacactcgccaatgttattcagaagctatctcaagtga
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