KEGG   Manduca sexta (tobacco hornworm): 119190013
Entry
119190013         CDS       T07401                                 
Name
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119190013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msex03400]
    119190013
Enzymes [BR:msex01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     119190013
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     119190013
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase mRNA_cap_enzyme BRCT_2
Other DBs
NCBI-GeneID: 119190013
NCBI-ProteinID: XP_037296882
LinkDB
Position
21:complement(5380056..5384828)
AA seq 928 aa
MSETVPFFVDRAKGGRANCKGCKTSCASGELRIAKLVASPYGEGQQMKSWHHVDCFINVL
LKQRPATKRVDSIDDIGNWGALSKEDQELILKKLNDMEILYAEKNNGKYTAKVIKNESVG
NISIKAEKSDFEKQVETEDDKFLTFCNLCRKIAKVDAYTEKTATVNRFFREGTDSKTFKG
TLSLWCKLLLPQVSKRVYNLKNKQLVKLFSKIFKTDHDDMSTHLEQGDVADTIQHFFKKS
KNVSPADKSTLTLQDVDEFLQELSKFTKEDEQIYHFKKIVKKCTLEDLKMLIRLIKGDLR
INAGPKHILEGVHPDAYAAFQASRDLNMVLDRVLPHGKGVKHKDVVQKSVEARIALMTPV
LPMLAEACKSVEMAMKKCPNGMFSEIKYDGERVQVHKKGNEFKYYSRALKPVMAHKVNHF
KEFLPKAFPQGNDLILDAEVLMVDVNTGKPLPFGSLGIHKQSEFKDASVCLFVFDCLYYN
GEVLLDIPIKKRRQILQENMVEVKNHVMFSEQQLIRKPSDLAKMIATVLEQGLEGLVLKD
LDSTYEPGKRHWLKVKKDYLFDGAMADTADLVVLGAWFGTGKKGGMMSVFLMGCLDKQRN
KWVTVTKVHTGHDDSTLERLQKELSPLMMKISQDSYKIPSWLDCNKGMVPDFVAIDPKKQ
PVWEITGTELTKANLHTADGISVRFPRVTRIRTDKNWESATNLEELKHLYKTSKEKTDVS
LLNKLAVAAENDEPPTKKAKTTDKVDTKVKKSPVKNKTLDGFLVKKRDLNSTNSSNASNL
DDDEMDTSTESVGKKHRKRENLDKSDTSEASVDMELDAKDMLPENPLPDVFKGKRLGFYP
DFISFQEDLRKHFERHWIAYGGNIVKSIRFIDVDYVVHKNKTISYENMQQLKKKLPPDVR
HVNKYWLIRCINEVELCDTEKYAVCVEP
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtcggaaactgtgccgtttttcgtcgatcgggctaaaggaggtcgcgctaactgtaaa
ggatgcaaaactagctgtgctagtggtgagttgcgcatagcaaagctagtagccagtcca
tatggcgagggccagcaaatgaagtcctggcaccatgttgattgcttcataaatgtgtta
ttgaagcaaagacccgccacaaagcgagtggattctatagatgacatcggcaactggggg
gctttaagcaaggaggaccaagagttgatattgaagaaactaaatgatatggaaatattg
tacgccgagaaaaataatggtaagtacacagcaaaggtaataaaaaatgaatctgttggt
aacatttcgattaaagctgagaagtcagattttgaaaaacaggtggagacggaagatgat
aagtttttaacattttgtaatttatgcagaaagattgcgaaagttgatgcatatactgaa
aaaacggcaacagttaatagattcttccgcgagggaacagacagtaagactttcaaaggc
accttgtctttatggtgtaagctactgttacctcaagtctcaaaaagggtgtacaattta
aaaaataaacagcttgttaaattattctctaaaatctttaaaactgaccatgatgatatg
tcaacacatttagaacaaggagatgttgctgacactatacaacattttttcaagaaatcc
aaaaatgttagccccgcagacaaatctactttgacattacaagacgtagatgaattccta
caagaactttcaaagttcacaaaagaagatgaacagatttatcatttcaagaaaattgta
aagaaatgcacattagaagacttgaaaatgctcataagacttattaaaggagatttgaga
attaatgctggcccaaaacatatattggaaggagtacatcctgatgcgtatgcagccttt
caagcctcaagggatttaaacatggtcttagaccgagtattgccacatggaaaaggagtt
aaacataaagatgtagttcagaagagcgtagaggcaagaatagcccttatgactcccgta
ttacccatgttggctgaagcatgcaagtctgtagaaatggcaatgaagaaatgtccaaac
ggcatgttctccgaaatcaagtatgatggagaaagagtacaagtacacaaaaaaggaaat
gaatttaaatattactcaagggctttaaaaccagtgatggctcataaagtgaatcatttt
aaggaatttttacccaaagcatttccacaaggaaatgatttgattttggatgcagaggta
ttgatggttgatgttaatactgggaaaccattaccgtttggttcattgggtattcacaag
caatcagaatttaaagatgcgtctgtctgtctgtttgtgtttgactgcttgtactataat
ggtgaggtattgcttgacataccaataaaaaagcgaaggcaaatactgcaagagaatatg
gttgaagttaaaaaccatgtcatgttctctgaacagcaattgatcaggaaaccatcggat
ttggccaaaatgattgctacggtacttgaacaaggcctggaggggctagtacttaaggac
ttagattcaacctatgagccaggcaaaaggcattggctgaaggtaaagaaagattatcta
tttgatggagcaatggctgatacagctgatctagttgttcttggagcttggtttggcaca
ggcaaaaagggcggtatgatgtcggtattcctaatgggatgtctggacaaacaacgtaat
aagtgggtcacagtaaccaaagttcatacaggccatgatgatagtacactagagaggctt
caaaaggaactttcacctctgatgatgaaaatatcacaagatagttacaaaataccctct
tggttggactgtaataagggaatggtaccagactttgtagctatcgatccaaagaaacaa
ccagtttgggaaattacaggtacagagttgacaaaggctaatctccacaccgcggatggg
atatcggtaaggtttccaagagtaactcgcatcaggacagacaaaaattgggaatctgca
acaaatttggaagagctcaaacatctttataagacatccaaagagaaaactgatgtctca
cttctcaataaactcgcagtggcagctgaaaacgacgaaccgccaacaaaaaaagcaaaa
acgacagataaagtagatacgaaagttaagaaaagtcctgtaaaaaataaaacattagat
ggttttctagttaaaaaaagagatttaaatagtacaaattcctcaaatgcaagcaacttg
gatgatgatgaaatggatacttcaactgaaagtgttggtaagaaacacaggaaaagggaa
aacttggacaaatcagatacatctgaagcaagtgtggatatggaattagatgcgaaagat
atgttgccagaaaatcctttgcctgatgtcttcaaaggcaaaagactggggttctatccc
gattttatatcttttcaagaagacttaaggaaacatttcgagagacattggattgcttat
ggcgggaacattgtaaagtcaataaggttcatcgacgttgattatgttgttcataaaaat
aaaactattagttatgaaaacatgcagcagctaaaaaagaaattgcctccagatgtgaga
catgttaataaatattggttaataagatgtataaatgaagtagaattatgtgatactgaa
aaatatgctgtttgtgttgagccctga

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