Mycobacterium shigaense: MSG_01011
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Entry
MSG_01011 CDS
T05717
Symbol
gadB
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg00250
Alanine, aspartate and glutamate metabolism
mshg00410
beta-Alanine metabolism
mshg00430
Taurine and hypotaurine metabolism
mshg00650
Butanoate metabolism
mshg01100
Metabolic pathways
mshg01110
Biosynthesis of secondary metabolites
mshg01120
Microbial metabolism in diverse environments
mshg02024
Quorum sensing
Module
mshg_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MSG_01011 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MSG_01011 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MSG_01011 (gadB)
00430 Taurine and hypotaurine metabolism
MSG_01011 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSG_01011 (gadB)
Enzymes [BR:
mshg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
MSG_01011 (gadB)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BAX91170
UniProt:
A0A1Z4EE03
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All DBs
Position
1048896..1050290
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AA seq
464 aa
AA seq
DB search
MPQHPSVPAHSIAPAYTGRLFTAPVPALRMPDESMDPDAAYRFIHDELMLDGSSRLNLAT
FVTTWMDPQAGRLMAETFDKNMIDKDEYPATAAIEQRCVCMVADLFHAEDLSDEDPSSAT
GVSTVGSSEAVMLGGLAMKWRWREKVGLKKGGDWKKRTPNLVMGSNVQVVWEKFCRYFDV
EPRYLPMEEGRYVITPEQVVDAVDEDTIGVVAILGTTYTGELEPIAEICAALDKLAAGGG
VDVPVHVDAASGGFVVPFLHSELKWDFRLPRVVSINVSGHKYGLTYPGVGFVVWRSKEYL
PEDLVFHVNYLGGDMPTFTLNFSRPGNQVVGQYYNFLRLGREGYTQVMHTLSSTARWLGE
QLRSGEHAELISDGTAIPVVSFRLAENRGYTEFDVSHELRGYGWQVPAYTMPDNATHVSV
LRIVVREGLSADLARALHDDARAALASLDKLKPGGHYRAEHFAH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgccccaacacccgtccgtgcccgcccactccatcgcgcccgcctacaccggccgcctg
ttcaccgcgcccgtgccggccttgcggatgcccgacgagtcgatggacccggacgccgcg
tatcggttcatccacgacgagttgatgctcgacggcagttcgcggctgaacctggccacc
ttcgtcaccacgtggatggatccccaggccggccggctgatggccgagacgttcgacaag
aacatgatcgacaaggatgaatacccggcgaccgccgcgatcgagcagcggtgtgtgtgc
atggtggccgacctgttccacgccgaggacctcagcgacgaggatccgtccagcgccacc
ggcgtgtcgaccgtcggctccagcgaggcggtgatgctgggcgggctggcgatgaagtgg
cggtggcgcgagaaggtcggcttgaaaaaagggggagattggaaaaagcgaaccccgaac
ctggtgatgggctccaacgtccaggtggtgtgggagaagttctgccgttatttcgacgtc
gaaccccgctacctgccgatggaggaggggcgttacgtcatcacccccgagcaggtcgtc
gacgccgtcgacgaggacaccatcggcgtggtcgcgatcctcggcaccacctacacgggc
gagctcgaacccatagccgagatctgcgcggcgctggacaagctggcagccggcgggggc
gtcgacgtcccggtgcatgtcgacgcggccagcggcggattcgtcgtgcccttcctgcac
tccgagctgaaatgggatttccggctgccacgggtggtgtctatcaacgtcagcggccac
aagtacggcctgacctatcccggtgtcgggttcgtggtgtggcgcagcaaggagtatctg
cccgaggacctggtgttccatgtgaactatctgggcggcgacatgccgaccttcacgctg
aacttctcgcggccgggcaaccaggtcgtcggccagtactacaacttcctgcggctgggc
cgggagggctacacgcaggtgatgcacacgctgtcgtcgaccgcccgctggctgggtgag
cagctgcgcagcggcgagcacgccgagctgatctccgatggaacggcgatcccggtggtc
agcttccggctggccgaaaatcgcgggtacaccgagttcgacgtctcccacgagctgcgc
ggctacggctggcaggtgccggcgtacaccatgccagacaacgccacgcacgtgtccgtg
ctgcgcatcgtggtgcgcgagggcctgtccgcggacctggcccgggccctgcacgacgat
gcccgcgccgcgctggcctccctggacaagctgaagcccggcgggcactaccgcgcggag
cacttcgcgcactga
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