Mesoterricola silvestris: METEAL_23490
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Entry
METEAL_23490 CDS
T09355
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
msil
Mesoterricola silvestris
Pathway
msil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
METEAL_23490 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msil03400
]
METEAL_23490 (recB)
Enzymes [BR:
msil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
METEAL_23490 (recB)
DNA repair and recombination proteins [BR:
msil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
METEAL_23490 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDU73175
UniProt:
A0AA48K9K9
LinkDB
All DBs
Position
complement(2757951..2761436)
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AA seq
1161 aa
AA seq
DB search
MTLRHPRPPVLERLGDAHCVIEASAGTGKTFTIEHLVVDLVLKGIPLERILVVTFTVKAT
QELRTRIRAKLQELVDLEVDDPTAESCWDLGEKELDALRAALLSFDRASISTIHGFCQQV
LQDGAFESGRLFTQEQVSAEEAFDHVFKNLVRTRFAVGGETPFFQRVLDAAGGLPQLADF
LRQLLKEKDALYQEGLDDLQGVLDRCDLDEARALLEEILLYRSVKDPKKRTQGPRVAALA
QGGYSLAQVHHLQERLEVLLEIVPEHKASGFPDLLWQDRRREKLVLLRDYLGKGAAHPGL
RELAGTCAVLARDFLALAGARYLPPLRDALSAYKRDQGFFDFGDMIELVHEGLLGPQGSP
MVDRLRERFQVALIDEFQDTDHLQWDIFRRVFLEGPGQRLILVGDPKQAIYGFRSGDLPT
YLRAVEEVKARTGRDPEVLDTNFRSTGPLIQAYCQVFEGAPGSPFFTEGNAGLWKGAVAC
GKRDLALTGPDGTPLPAIRVLETPGDKPARARKELAGRLAQVLRETLEAPPLFGRGDKAA
PIRPEDIFVLTRTAAEGLQVAEALRGAGVPYAFFKQEGLFGTEEAKALRDLLVAIDAPLD
EGARGRALLGPFFGLTFAETEACRELPETHPILRRLHGWRDLARERRYGDLFARILSESG
VTQRLLFLEEGERVLTNVQHLAELLLAEAVRRHGTLRDLATVLQRWIDGLERPAVEDGDV
QRLEREGGAVQILTMHKSKGLEAVVVAVYGGISTPRSSGAAYRYHDEALRRQVWVGGKDG
APGAIADAIAREDVEEWERLLYVALTRAKGQLILPHFTPAPPARGGNRSFHPEGDPKGPY
GCVNRRLRNLLPGEAEPVPHPAFRRIPPPGTEPPPPPPVQARLATWNPQLPEPAAEPDFA
ALAQAGRPLWSFSYTSLERGLRERRDPADAEERTEMGYTPTPGDGPSGGARLGTLVHDLL
EVIPLDSFGNRTFEAWRQDPAIQALLREIPREALTHVARWAWHALNGPLPLPDGTAAVLA
QAGHVLRELAFLTPYPGRQDLLNGSMDVLFQWQGRAYVLDWKTDRSPAFDPETLGAAVQE
KYRLQLMAYTVTACRFLGFGDEATYEAGFGGFLYVFLRGLPEEGVWTTRPTWTQVQRWED
ELRRLDVESLIPAHAGGGRHA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccgccatcccagaccgcccgtcctggagcgcctcggcgacgcccattgcgtc
atcgaggccagcgccggcaccgggaagacgttcaccatcgagcacctcgtggtggacctc
gtcctcaagggcatccccctggagcggatcctcgtggtgaccttcaccgtgaaggccacc
caggagctccgcacccggatccgcgccaaactccaggagctggtggatctcgaggtggac
gaccccaccgccgaatcctgctgggacctgggcgaaaaggagctggacgcgctccgcgcc
gccctcctgtccttcgaccgcgccagcatctccaccatccacggtttctgccagcaggtg
ctccaggacggcgccttcgagagcggccggctcttcacccaggagcaggtgagcgccgag
gaggcctttgaccacgtcttcaagaacctcgtccgcacccgtttcgccgtgggcggggag
acgccctttttccagcgcgtcctggacgccgccggaggcctgccccagctggccgacttc
ctccggcagctcctcaaggagaaggacgccctgtaccaggaaggcctggacgacctccag
ggcgtcctggaccgctgcgacctggacgaagcccgcgccctgctggaggagatccttctc
taccgttccgtcaaggaccccaagaagcgcacccagggcccccgcgtggcggccctggcc
cagggcggctacagcctggcgcaggtccaccacctccaggagcgcctggaggtgttgctg
gaaatcgtgcccgagcacaaggcctccggcttcccggacctgctctggcaggacaggcgc
cgggaaaagctcgttctcctccgggactaccttggcaagggcgccgcccacccgggcctg
cgcgaactggccggcacctgcgccgtcctggccagggatttcctggccctggccggcgcg
cgctaccttccgccgctccgggacgccctttccgcctacaagcgcgaccagggcttcttc
gacttcggcgacatgatcgaactggtccacgaaggcctcctgggtccccagggcagcccc
atggtggaccgcctccgggagcggttccaggtggccctcatcgacgagttccaggacacc
gaccacctgcagtgggacatcttccgccgggtgttcctggagggccccggccagcgcctc
atcctcgtgggcgatcccaaacaggccatctacggcttccgcagcggggacctgcccacc
tacctccgggccgtggaggaggtcaaagcaaggaccggccgggaccccgaggtgctggac
accaacttccgttccaccgggcccctcatccaggcctattgccaggtcttcgagggcgcc
ccgggaagccccttcttcaccgaggggaatgccggcctctggaagggcgccgtggcctgc
ggcaagcgcgacctggccctcaccggcccggacgggacgccgctgcccgccatccgcgtc
ctggagacgcccggcgacaagcccgcgcgagcccggaaggaactcgccgggcgcctggcc
caggtgctccgcgaaaccctggaggcaccgcccctcttcgggcgcggcgacaaggccgcc
cccatccggcccgaggacatcttcgtgctgacccgcaccgccgccgaagggctgcaggtg
gccgaagccctccggggcgccggcgtgccctacgcgttcttcaagcaggagggtctcttc
ggcacggaggaggcgaaggccctgcgcgacctgctggtggccatcgacgcccccctggac
gagggcgcccggggccgggccctgctgggacccttcttcgggctcaccttcgccgagacc
gaagcctgccgggaactgcccgagacccaccccatcctgcgccgcctccatggctggcgt
gacctggcccgggagcgccgctacggcgacctcttcgcccgcatcctcagcgagagcggc
gtcacccagcggctcctcttcctggaggagggggaacgcgtcctcaccaacgtccagcat
ctggccgagctcctcctggccgaggccgtgcgccgccacggcaccctgcgcgacctggcc
accgtcctccagcgctggatcgacggactggagcgccccgccgtggaggacggcgacgtc
cagcgcctggagcgcgaagggggcgccgtgcagatcctcaccatgcacaagtccaagggc
ctggaggccgtggtggtggcggtctacggcgggatctccaccccccggagcagcggcgcc
gcctaccgctaccacgatgaggccctgcgccgccaggtctgggtgggcggcaaggacggc
gcccccggcgccatcgccgacgccatcgcccgcgaggacgtggaggaatgggagcgcctc
ctctacgtcgccctcacccgcgccaagggccagctcatcctgccccacttcaccccggcc
cccccggccaggggcggcaaccgctccttccaccccgaaggcgatcccaagggcccctac
ggctgcgtcaaccgccgcctgcggaacctgctgcccggcgaggcggagcccgtcccgcac
cccgccttccgccggattccgccccccgggacggaaccccctccgccgccgcccgtccag
gcccgcctcgccacctggaacccccagttgccggaacccgcggccgagcccgacttcgcc
gcacttgcccaggcgggccgccccctctggtccttctcctacacgtccctggagcggggc
ctccgcgagcgcagggaccccgccgacgccgaggagcgcaccgaaatgggctacaccccc
acccccggcgacggcccctccggcggcgcccgcctgggcaccctcgtgcacgacctcctg
gaggtcatccccctggacagcttcgggaaccggaccttcgaagcctggcgccaggacccc
gccatccaggccctcctgcgggagattccccgcgaagccctgacccacgtggcccggtgg
gcctggcatgccctcaacgggccgctgccgctgccggatggcaccgccgccgtcctggcc
caggccggccacgtgctccgggaattggctttcctgaccccgtaccccggccggcaggat
ctcctgaacggctccatggacgtgctcttccagtggcaggggcgcgcgtacgtcctggac
tggaaaaccgaccgatccccggccttcgacccggaaaccctcggggcggcggtgcaggag
aaataccgcctccagctcatggcctacaccgtcaccgcctgccgtttcctgggctttggg
gacgaggccacgtacgaggccggcttcggcggcttcctctacgtcttcctccgcgggctc
ccggaggagggcgtgtggaccacccgccccacctggacccaggtccagcggtgggaggac
gagctgcgccgcctggacgtggagtccctgatccccgcccacgccggaggaggccgccat
gcctga
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