Magnolia sinica: 131225116
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Entry
131225116 CDS
T09699
Name
(RefSeq) syntaxin-43-like isoform X1
KO
K08489
syntaxin 16
Organism
msin
Magnolia sinica
Pathway
msin04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131225116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131225116
Membrane trafficking [BR:
msin04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
131225116
BRITE hierarchy
Motif
Pfam:
SNARE
Prominin
Syntaxin_2
FlxA
Syntaxin
EF-G-binding_N
ZSWIM1-3_C
Motif
Other DBs
NCBI-GeneID:
131225116
NCBI-ProteinID:
XP_058076532
LinkDB
All DBs
Position
14:10254586..10271222
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AA seq
324 aa
AA seq
DB search
MATRNRTPLFRKYRDALRNVRAPVFSSSSHPSSSGGPVIELVSASLLHPNRSYAPLSTED
PGNSSRGALTVGLPPAWVDDSEEIAANMQRARTKMAELVKAHGKALMPSFGDGKEDQHKI
EVLTQEITDLLKRSEKRLQKLSTSGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSTYLK
RLRRQKEEGQDGVDLEMNLNGSKSKQEDDDFGDVGFNKYQMSKLKKSEAFTAEREREITQ
VVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEEGFKELQKAERTQRKGGMI
MCATVLVILCFIMLVLLVLKTIFL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagaaatcgaactcctctattcagaaaatacagagacgctttacggaacgtc
cgggctccggtgttctcttcttcatctcatccatcgtcttccggcgggcccgtgattgaa
ttagtcagcgcgtcgcttctgcatccaaatcgatcatacgctccactcagcaccgaagat
cccggcaattctagtaggggtgctcttacagtgggtctacctccagcttgggtggatgat
tcagaagaaatagctgcaaatatgcaacgtgcacggacaaaaatggcagagttagtcaaa
gctcatggaaaggctttaatgccctcttttggagatggcaaagaagatcaacacaagatt
gaggttctaactcaagagataacagatttgctcaagagatcagagaagagattgcagaaa
ctttctactagtgggccttctgaggattcaaatgtcagaaaaaatgtacagcgatctctt
gcaacagaccttcagaacctttcaatggagcttcggaaaaaacaatctacttatttgaag
cgcctacgacggcaaaaagaggagggtcaagacggggtagacttggagatgaatttaaat
ggaagtaaatcaaaacaggaagacgatgattttggtgatgtgggttttaacaagtatcaa
atgtccaagctgaaaaagagcgaggctttcactgctgaaagggaaagagagatcacacag
gttgtggaatctgtaaatgagcttgctcaaatcatgaaggatctctcagtccttgtcata
gaccagggcaccatcgttgatcggattgactacaatatacagaatgttgcagcttcagtg
gaagaaggctttaaagagctgcagaaggcagaaagaacgcagaggaaagggggaatgata
atgtgcgcgacagtgctcgtcatcctctgcttcattatgttggtgcttctggttctcaag
acgatattcttgtga
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