Magnolia sinica: 131225374
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Entry
131225374 CDS
T09699
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131225374
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
131225374
BRITE hierarchy
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
DUF746
GDH_C
AKAP28
Motif
Other DBs
NCBI-GeneID:
131225374
NCBI-ProteinID:
XP_058076882
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Position
14:complement(2852929..2854726)
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AA seq
527 aa
AA seq
DB search
MDPTSSRFCKNCREPSIIVDPISNARVCTSCGCEQSFDNFQTQAPRFADGPQGTFVHIGE
FNYKERKRFDARNQIDDISSSLSLSAQRTSEVTTMIEQITDGEYGMGRWFEVLIAACAHV
ITRKNNLPLSISEIASITGYDVHEIGRMVGRVTEFMDLKLPDFNVVMALDRAIRNCHCFS
GIQEEKQDEMAKQGRFILQCCVKWFLTTGRQPLPMVAAVLAFVSEVNVAGPTIDDIAKDI
HAGVATSRRRYKELKETLVKVAQALPWGKDVTVKNLVRNAPLILQYMSMKSKEKPLDSKL
TMLDLQEVASECMKKEIEYAVDGNTVGKVEDRNGAAGASSDDLEKLKLSEDCLWRTHTDF
LNGLDSFKLSGGEVRAECRNKRKRGSGIVGWNEWVVKLDSNKRLSLEQILEKNVGFDALP
PSFVAGTEACRRRREKINAAKLRIDEIRKPTTNGSVVEKHRILKKQLQTTKECQNGAERC
NIDSEDCIIELLLLHQVKEEEIEQGNYNRLLDLHVFNSSSPHKAFAL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaccccacctcatcccgcttctgcaagaactgcagggagccgtccatcatcgtcgac
ccaatctccaacgcacgtgtctgcacatcttgcggctgcgagcagtccttcgacaacttc
caaacccaagccccccgcttcgctgatggccctcaaggcactttcgtccacatcggcgaa
ttcaactacaaagagaggaaacgcttcgacgcccgaaaccagatcgatgacatatcatca
tccctcagcctatcagcccagcgcacctctgaggtaacaaccatgattgaacagatcacc
gatggcgagtatggcatgggccgctggttcgaggtcctgatcgccgcatgcgcccatgtc
atcactcgcaagaacaacctcccactctccatctccgagattgcatccattaccggctat
gatgtccacgagattggacgcatggtgggccgcgtcactgaattcatggacctcaagctg
cctgatttcaatgtcgtgatggctttggatcgggccataaggaattgccactgtttctca
ggcatccaggaggaaaaacaggatgagatggctaagcagggacggttcatcctgcagtgc
tgcgtgaagtggttcttgacgacaggccggcagccactcccaatggtcgctgctgttctg
gctttcgtctcggaggtgaatgtggcagggcccacgatcgatgatatagcgaaggacatc
catgcaggggtagccacgagtaggcggcggtataaagagttgaaggagacactcgtaaaa
gtcgcacaggcgttgccatgggggaaggacgtcacagtaaaaaatcttgttaggaatgca
cctttgatccttcaatatatgtcgatgaaatcgaaggaaaagcctttggattccaagctg
accatgcttgatttgcaggaagtagcaagtgagtgcatgaaaaaggaaattgaatacgct
gtggatggcaatactgtaggaaaggtagaggatcggaatggggcggcgggtgcaagctct
gatgatttggagaagcttaagctttctgaggattgcttgtggaggactcacacagatttt
ctaaatgggttggattcttttaaattgtcgggtggagaggtcagggcagaatgcaggaat
aagagaaagagaggaagtgggattgtggggtggaatgagtgggtggtaaaattggattca
aataaaaggctttcacttgagcaaatacttgagaaaaatgttggctttgatgctcttcct
ccatcttttgtggctggtacggaggcatgtaggagaaggagagaaaagataaatgctgca
aagcttcgaatcgatgagattaggaagccaacaaccaatgggtcagttgtggagaagcat
agaatccttaagaaacaactgcaaactacgaaagaatgtcaaaatggagcagaaagatgc
aatattgattcggaagattgtataattgaactcttactcctccatcaggtgaaagaggag
gaaatagagcaaggaaattataataggttgctcgacctccatgtcttcaactcctcgagc
ccccacaaggcatttgcactttga
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