Magnolia sinica: 131236888
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Entry
131236888 CDS
T09699
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131236888
09122 Translation
03013 Nucleocytoplasmic transport
131236888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131236888
03041 Spliceosome [BR:
msin03041
]
131236888
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131236888
Spliceosome [BR:
msin03041
]
Complex C
Other components
EJC/TREX
131236888
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131236888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
131236888
NCBI-ProteinID:
XP_058090388
LinkDB
All DBs
Position
2:31507928..31548943
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AA seq
653 aa
AA seq
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MAEAPSGLRILLHQHVKERAPVHISCHADRDRVLEVFKNALMQDGPPSSFALQAVQDAIK
PQRQTVLVLEENQSLENALRTLLQELVSSAVQSGEQVMQYGKSIDDAEKLQGQISRLLDI
VLYLCERGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKLVMLR
TCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDAPDGIS
IDFNFYKTFWSLQEHFSNPPSTTLAPAKWQKFASNLMVVLDTFEAQPLSEDDGNANNLEE
GEAEVLSIKYLTSSKLMGLELKDPSFRRHILVQCLIIFDYLKAPGKNDKDGPLESMKEEI
RSCEERVKKLLQMIPPKGKEFLCSIEHILEREKNWVWWKRDGCPAFEKQATERKTGQDGV
KKRKPRWRLGNRELSQLWKWADQNPNALTDSQRVRNPSLMEYWKPLAEDVSPMDVSAGIE
AEYHHKNNRVYCWKGLRFASRQDLEGFSRFTDHGIEGVVPPELLPPEVRSKFHARPGEKS
KRARKDGEAKGAIPNAEDNQSAIAAAEIDGGGNGAELDDSAPPMDVDTAAVNISQSRDPT
PEEINKQSPDIDVGPEAGQLEAEAEADVDGETDPEAEPDATSRDAQGGGRESP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctccatcaggccttcggattcttctccaccagcatgtgaaagagcgagcc
cccgttcacatttcctgccatgccgatcgagaccgagtcctcgaagtatttaagaatgct
ctgatgcaagatgggcccccttcgagtttcgctctccaggcagtccaagatgctatcaaa
cctcagagacaaacagtgctggtcctcgaggagaaccaatcactggaaaatgctctccgg
acgttacttcaggaactggtgtcatctgcagttcagtctggagaacaggttatgcaatat
gggaaatcaattgatgatgcagaaaaacttcagggtcaaatatcacgacttcttgacatt
gtgctgtatctttgtgaaagaggccatgttgagggtggcatgatattccagctgctcgag
gatttaacagaaatgtctacaatgagagactgcaaagaagttttcggttatattgagagt
aaacaagatattttggggaagcaagagctgtttgggcgaggaaagcttgtgatgttgagg
acatgcaatcagcttcttcgtcggctatcaaaggcaaacgatgtagtgttttgtggacga
attcttatgtttcttgctcattttttcccattatcagagcgctcagctgtgaatataaaa
ggagttttcaacacatccaatgaaacaaagtatgaaaaggatgctcctgatggaatttct
atcgacttcaacttctacaagaccttttggagtttacaggagcatttctctaaccctcct
tccacaacacttgctcctgccaagtggcagaaatttgcatccaacttaatggttgtgctg
gatacgtttgaagctcaacctttgagcgaggatgatggaaatgcaaacaatcttgaggaa
ggagaggcagaagttttgagcattaagtatctgacaagcagtaaattaatggggttagag
ttgaaggatccaagctttcgtcgccatattcttgttcagtgccttataatatttgattat
ctgaaggcacctgggaaaaatgacaaagatggccctttggaaagcatgaaagaagagatt
aggtcttgtgaagagcgtgttaagaagcttcttcagatgattccacctaaaggaaaggag
ttcctctgtagcattgagcatatattggaacgagagaaaaattgggtttggtggaaacgt
gatgggtgtcctgcatttgaaaaacaagccacagagagaaaaacaggtcaagatggagta
aaaaagcgtaagccacggtggagattgggaaacagggaactctctcagttgtggaagtgg
gcagatcagaatcctaatgctttgactgattctcaacgtgtccgcaacccttctctcatg
gagtactggaaaccacttgctgaagatgtgagcccaatggatgtttcagctggaatagaa
gctgaatatcaccacaaaaacaatcgtgtttattgctggaaaggcctccgttttgcatct
cggcaagacttggaaggattttctcgatttactgatcatggtattgaaggagtcgtgccg
ccagaacttctgccaccagaagtccgttccaaatttcatgctagaccaggcgagaagtct
aaacgagctagaaaggatggggaagcgaaaggtgctatacccaatgctgaagataaccag
agtgcaatcgctgcagctgagattgatggaggtggaaatggtgctgaactagatgattca
gccccaccaatggatgttgacactgcagctgtcaacatctctcaaagtagggacccaaca
ccagaggaaattaataagcagagccctgacattgacgtgggtccggaggcagggcagtta
gaagcagaagctgaagcagatgtggatggagagacggatccagaggcagagccagatgcg
acaagtagagacgcgcaaggtgggggcagagaaagcccctaa
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