Magnolia sinica: 131239567
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Entry
131239567 CDS
T09699
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
msin
Magnolia sinica
Pathway
msin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131239567
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msin01002
]
131239567
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131239567
Enzymes [BR:
msin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131239567
Peptidases and inhibitors [BR:
msin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131239567
Ubiquitin system [BR:
msin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131239567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
131239567
NCBI-ProteinID:
XP_058093315
LinkDB
All DBs
Position
3:complement(13776655..13803877)
Genome browser
AA seq
1095 aa
AA seq
DB search
MGKKMKRKTRSAYKDKRVSSNSLLSISEHSNPTVEIMNEGVSAGKERKACNHIACNHIDN
SVDLDKISWNISSSDNLKCKDCRDGHGVDRRAGKGKGKQARKKGTGSADTKSELKCLWVC
LSCGHVACGGAVGDSTPLSHALRHAKQTRHPSAVQLEDPLLCWCFSCNSLIPVEKPEENG
GRNNILFQAHELIKGWSMKGAVVDVEDVWFGGGNVEERTTTEIGESSISNTRGYKVRGLP
NLGNTCFFNSVMQNLLAIDLLRVYFMDLDRSVGPLTMALRKLFTETNIEVDFRNGTNPKS
LFGCICSKAPQFRGYQQQDSHELLRYLLDGLHTEELSARKSFTSSSEDGVASNMGPTFVD
VIFGGQLSSTVCCTECGHSSIVYEPFLDLSLPVPTKKPPPRKAVISQPKKKKQPLKEQRN
KGGKNRESKNADTAPLSAQCATRGVSLPLECRESSSTLPSGALTSIAPAKEQAAALVTDD
NLPWLDFIGQDTPTEQTVALAAADDSLWLDYIGQDTPKGETASLAAADGLSWLDYIGQDT
AFDDASSVSQSYDISAVQDSECKQVFQNEDTTQYSIELPSDVCTLDMEPKAGIESVENRC
IDELPLHVQDSEVLLLPYKDEVSAMGEREGMTPDCQNPTIVASEDAPSKDLIEAASSING
WGEAEQDFDGFGDLFHEPETVSDPKMESSLGDLSFQANDEMETALLAGNSSESNQDEVDN
TNAQVSIDSCLAYFTKPELLSNEHAWHCESCSKNVRCQRMEARNGEKQVVSRDKQSKTLK
SRTNRGGSKSKNSPTGLDEGRLSSATFKTLDDEKPASSSTSATTVQTAHPHLVRLDVSDA
SAAQKLLGPTGEESTYTTHELRRSGNDMGEELLSNGVADHAEISWRDDDLGARNHAPQDL
PHTSLNDQASFQSDGSKTIQLSSRDKDSFCEVDQVRQKESHSSHGGHETDDSEVEEINSG
SGKVKRDATKRYLISKAPPILTIHLKRFSQDARGRLSKLSGHVSFRDTLDLWPYMDPGCE
EKEKCRYRLVGVVEHSGTMRSGHYVAYFKAESRGNTIKKEDGTSLWFYASDAYVREVSLT
EVLQSEAYILFYEKM
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaagatgaaaaggaagacacgaagcgcatataaggataagcgagtttcctcc
aattctctacttagcatttcagagcattcaaatccgacagttgagattatgaacgaggga
gtttcggcaggaaaggagagaaaagcatgcaatcacattgcatgtaatcacattgataac
agtgtggatttggataagatttcatggaacatcagttcttcggacaaccttaagtgtaaa
gattgcagggatggccacggtgttgataggagagcaggtaaaggaaagggcaaacaggct
aggaagaaaggaacgggatctgcagacacgaaatcagaactgaaatgtctatgggtctgt
ttgtcttgtggacatgttgcgtgtggaggggctgtcggggattcaacacccctaagccat
gctctccggcatgctaaacaaacccgtcatcctagtgccgttcaacttgaagacccgctt
ctctgctggtgcttttcatgcaattcattgattccagttgaaaaaccggaggagaatggt
ggaaggaacaacatcttattccaagcacatgaattgattaaggggtggtcaatgaaaggg
gctgttgtggatgtcgaggatgtgtggtttggtggtggaaatgttgaagaaagaacaacg
acagaaatcggtgaatcttcaatttcaaatacaagaggttataaggtaagaggtctgcct
aaccttggaaatacttgcttctttaactcagtcatgcagaatcttcttgcgatagatctt
ttgcgggtatatttcatggacttggaccggtccgttggacctctgacgatggctttgagg
aagctcttcacagaaacgaatattgaagtggatttcagaaacggcacaaatcccaaatcc
ctttttgggtgcatatgttccaaggctccccagtttaggggatatcagcaacaggacagc
cacgaattgctccgatatttacttgacgggttgcatactgaggagttgagtgccagaaaa
tcattcacttcctctagtgaagatggtgtcgcttcgaatatgggtcccacttttgtggat
gttatttttgggggccaactctctagcacagtttgttgtacagaatgtgggcactcatca
atagtctacgagccgtttttggatctatcactgccagtcccaacgaagaaacctccaccc
agaaaagctgtcatttctcaacccaagaaaaaaaagcagcctttgaaggaacaacggaat
aaaggtggaaaaaatcgagaaagtaagaatgccgatactgctccattatcagctcaatgt
gcaacaagaggtgttagtttgccattagaatgccgcgaatcttctagcactcttccttct
ggtgctcttacttctattgcgcctgctaaggagcaagccgctgctttggtcacggatgat
aacttaccgtggttggatttcattggacaggatacacctacagaacaaacagttgctttg
gcagcagctgatgattcattgtggttggattacattggacaggatacacctaagggagaa
acagcttctttggcagcagctgatggtttatcatggttggattatattggacaggataca
gcatttgacgatgcaagttcagtttctcagagttatgatatttcggctgttcaagattcc
gaatgcaagcaagtctttcaaaatgaggatactacacaatatagtattgaattgccaagt
gatgtttgtacgttggatatggagccaaaagcaggaatagaatctgtggagaatcgttgc
attgatgaactccctttacatgttcaagattccgaagttttgttgcttccttataaagat
gaggtttcggctatgggagagagagagggaatgacgcctgactgtcaaaatcccacaatt
gtggcatccgaagatgctccaagtaaggatctcattgaagcagcctcatctattaatggc
tggggtgaagctgaacaagactttgatggctttggtgacttatttcatgagccggagacg
gtttctgatcccaagatggaatctagtttaggtgacctgagctttcaagcaaatgacgag
atggaaacggctttattagccggaaatagcagtgaatctaatcaagatgaggtagataac
acaaatgctcaagtatctatcgatagttgcttggcttatttcacaaaacctgagcttctt
tctaatgagcatgcatggcattgtgagagctgttctaagaacgtgcgatgccaaaggatg
gaagctagaaatggcgaaaagcaagttgttagtagggataagcagtcaaaaacattaaag
tctcggaccaatagaggcggatcgaaaagtaaaaattctccaactgggttagatgaaggc
cgtctgagttctgctacattcaaaaccttagacgatgaaaagccggcaagcagttcaact
tctgcaactactgtccaaacagcacatccacatctcgtaagactggatgtctctgatgca
agtgctgctcagaaactgctcggtcctactggtgaagaatcaacttacactacacatgaa
ctcagacggtcgggaaatgacatgggcgaagagcttttgtccaatggtgtcgctgatcat
gctgaaatttcttggagggatgatgatcttggtgcacggaaccacgctcctcaagaccta
ccacacacttcgcttaacgatcaagctagcttccaatcggatggtagcaaaacgatccag
cttagttctagagacaaggacagcttttgtgaggttgatcaagtgcgacaaaaagagtcc
cattcgtcacatggaggacatgagacggacgacagtgaggttgaggaaatcaacagtgga
agtgggaaggtcaagagagatgcaactaaaagatatcttattagtaaggccccacctatt
ctaacaattcatttaaagagattcagccaagatgctcgtggtcgattgagtaaattaagc
ggacatgtgagcttcagagatacgcttgatctttggccttatatggaccccgggtgcgaa
gagaaagagaagtgtaggtaccgcctcgtgggggtggtggagcattcggggaccatgaga
agtggacattatgttgcatatttcaaagccgaaagcagagggaacacaatcaagaaagaa
gacgggacttcgctgtggttttatgcaagtgatgcctatgtgcgtgaggtctcacttaca
gaagtacttcaatccgaggcttatattttattttatgagaaaatgtag
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