Magnolia sinica: 131251568
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Entry
131251568 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131251568 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131251568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131251568
03019 Messenger RNA biogenesis [BR:
msin03019
]
131251568
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131251568
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
131251568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
131251568
NCBI-ProteinID:
XP_058108327
LinkDB
All DBs
Position
1:90922384..90951226
Genome browser
AA seq
1171 aa
AA seq
DB search
MKMEMESSRRSREPGLKKQRLAEDAPPIGAIVDRNRPFPQKAPIARGSLRSRDRDNGRED
PALEAYHPEQQPQPQPQPQQLQHQQQQEIVGQYKTALAELTFNSKPIITNLTIIAGENLP
AAKGISSVVCTNILEVPTDQKLPSLYLLDSIVKNIGRDYIKYFATRLPEVFCKAYRQVDS
SVHPAMRHLFGTWKGVFHPATLQIIEKELGFTATINGSSSATTSSRPASESQRPPHSIHI
NPKYLEARQRLQQSSRSKGVRSDNTENTVTSSEDVERPDRTAAVDSSRQWADLPAKMHNM
HHPQREQLDEPAHEKNLGAGYGDYEFVSDLPQRSDLGAGKANDRVAVRGREKPWYGTGSS
DVETTAAERNGSDISNAYGNYQAPRPSQALTQMHAPNNMATRSSKGMLENWKNSEEEEYM
WEDMNSRLKDHGGAENSQKDGWTYDGMEKPISLQRGKWMPLETELLETQWNTLNTSQLKK
PSGGGDRVPLRRDSEDELAQLHGQPRNGSRLIRETSTDSLSREHGEQTSFGQQTAFTWSS
LEPHPVDGLNCTRIGSTISEQSDSTPPTGSVSMIVSSSLSRTVLKPHIRLPVSPSSFGSL
ANVVSGSSGKLGHQQSQPLGLAPSVPSHGHQHPHSPSSSVLHKHQHSRSLSDHNHTLAQL
LPQPGEISSQPAREPGQVPHIKVAQDSTAAVPQNQIQSSMLRNLQLPSSQLPSQHLQNPL
PSLALLDQLRHHVPLPQQPLPEVSLQPMQSQPSGQNQKLSSPTAIVSAPQTTGNLRPGHS
NSPTDIVGQSSAGSLLLALMKSGLVTNSFPSLSYLSSSTPSILKSQPPLPSGPPPVPLTT
SSLPTVTPASVPGPTSHVDIPASAAHPPRVVPPPLPPGPPPPSSHVTLSQMSNSTSTVLN
PLSTLLSSLVAKGLLSEPPKESPAVTACQIPIELQNQSTGTTTSASMPVSCSSPSSSLSH
SSAKESAAKGTTLSQATTVETKDMIGTMFKPEIIRQLHPLVIDALFDDLPHQCSICGLRL
KLEEQFARHLDWHTSMKHELSSCKSVSREWYASLRDWVAGNLGPSCGPMPTVSMEVVATS
AEKCEPMVPADESQVICVLCGEPFEDFYSDERDEWMYKGAMYMTTLDGKGDAGHTDGSAA
EGPIVHANCVSRSSNGELDMAGPVEMDQVDG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggagatggagagttctcgccgatcgagagaaccaggcctgaaaaagcaaaga
ctggccgaagatgccccaccgatcggcgccatcgtcgatcgcaaccgtccgtttcctcag
aaagcccccatcgcccgtggcagtctccgctcaagggatagagacaacggacgcgaagat
ccagctcttgaagcctatcatcctgagcagcagccgcagccgcagccgcagccacagcag
cttcagcatcagcagcagcaggagattgtaggacagtacaagacagccctcgcggagctg
actttcaactcgaagccgatcatcaccaacctcacgatcatcgctggggagaatctcccg
gctgcaaaagggatatcctccgttgtctgtaccaacatcctcgaggttcctactgatcaa
aagctgccctctctctatcttctagatagtatcgttaagaatattggaagagattacatc
aaatattttgccaccaggcttccagaggtattctgcaaggcttatagacaggttgattct
tcagtacatcctgctatgcgacatctttttgggacttggaaaggggttttccaccctgct
acacttcagatcattgagaaagaacttggcttcacagccacaatcaatggttcatcttct
gcaaccacttcatctaggcctgcttctgagtctcaacgcccaccacacagtatccacata
aaccccaagtatttagaggcaagacaacggctccagcaatcaagcaggtcaaagggagta
cgcagtgacaacactgagaatacagttacctcatcagaggatgtagagaggcctgacaga
acagctgctgttgatagttcaagacaatgggcagatctgcctgctaagatgcataacatg
catcatcctcaaagagaacaattggatgagcccgcccatgagaagaacctaggtgcagga
tatggagattatgaatttgtttctgatcttccacagcgttcagacctaggagctggaaaa
gcaaatgacagggttgcagtgagaggacgagaaaagccttggtatggaactggtagcagt
gatgtagagacaacagctgcagaaaggaatggttctgatatttcaaatgcatatggaaat
taccaagcacccagaccttcgcaagcacttactcagatgcatgcaccaaataacatggca
acaagaagcagcaaagggatgctggagaactggaagaactcggaggaagaagagtatatg
tgggaggatatgaactccagattgaaagatcatgggggggctgaaaactcacagaaagat
gggtggacttatgatggcatggagaagccgataagcttgcaaagaggcaaatggatgcct
ttggagactgaacttcttgaaactcagtggaacacactcaatacttctcaattgaagaag
ccttctggaggtggagatagagttccattgcgaagagattctgaagatgaacttgcacag
cttcacggccaaccacgtaatgggtccaggcttattagagaaacttccacagattcacta
tccagagaacatggagaacaaacttcatttgggcagcagacagcatttacgtggtcatca
ctagagccacatcctgtggatggtttgaactgcacacgcataggttcaacaatttcagaa
caatctgacagtacccctccaactggtagcgtatcaatgattgtgagttcatctttgtcc
agaacagtacttaagccacatataaggctacctgtatctccgtcaagctttggatctctg
gccaatgtggtttcaggatcaagtgggaagcttgggcatcaacagtcacagcctctggga
ctagcaccatctgttccatcacatggacaccaacatccccactcaccttcatcatcagtg
ctccataagcatcagcattcccgtagtttgagtgaccacaatcacacactagcgcagttg
ttacctcaaccaggtgaaatatcttctcagcctgcaagagagccaggccaagtaccacat
attaaagttgctcaagattcaactgctgctgtgcctcaaaatcagattcagtcaagcatg
ttgcgcaatttacagttgccctcttcacagctgccctctcagcatttgcaaaatccattg
ccttctttagcactgctagatcagctcaggcatcatgttcccctcccacagcagccactg
ccagaagtatcgctgcagccgatgcaatctcaaccatctggtcagaaccagaagctatca
tctccaacagccatcgtcagtgctccccaaacaacagggaacctaaggcctggccattca
aatagtcctacagatatcgtgggacaatctagtgcagggagtttattgttggcccttatg
aagagcggactggtcaccaatagttttccgagcctgagttatctgtcatcatcaacgcca
tctattttgaagagtcagcctcctttaccaagtggacctcctcctgtcccgctgacaaca
tcttccttgcctacggtaacgcctgcttctgtaccaggcccaacctcccatgttgatata
cctgcttctgccgcacatcctcccagagtagtcccgcctccactgccacctggcccacca
cctccctcatcccatgtgacattgtctcagatgtcaaactctactagtactgtcttgaat
cccctctctactcttttgagctcattagttgcaaaaggattattatcagaaccaccaaaa
gaatcaccagctgtcactgcatgtcagattcccatcgaactccagaatcagagcacaggc
accactaccagtgcctccatgcctgtttcttgtagttcaccttcctcatccctatctcac
tcttctgcaaaggaatctgctgcaaaaggcactaccttgtctcaagcaacaacagtagag
acaaaggacatgataggcactatgtttaaaccagaaatcatccgacaattgcatccatta
gtgattgatgccctatttgatgaccttccacatcagtgcagtatatgcggccttcgacta
aaactcgaagaacagtttgcgagacacttggactggcatacttcaatgaaacatgagttg
agcagttgcaagagtgtttcccgggaatggtatgcaagtttgagggactgggttgctggg
aatttgggaccttcatgtggacctatgcctactgtttccatggaagtggtggccacatca
gcggagaaatgtgaaccaatggtccccgcagatgaaagccaggtcatatgtgtgttgtgc
ggagagccctttgaggatttttacagtgacgaaagggacgaatggatgtacaagggtgca
atgtatatgactacacttgatgggaaaggtgatgcaggacacactgatgggagtgctgca
gagggccctattgtacatgccaactgcgtgtcaagaagctcaaatggtgaattggacatg
gctgggcctgttgaaatggatcaagtggatggttga
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integrated database retrieval system
