Magnolia sinica: 131254286
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Entry
131254286 CDS
T09699
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131254286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131254286
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131254286
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131254286
BRITE hierarchy
Motif
Pfam:
CAF1
Cas_TM1802
Motif
Other DBs
NCBI-GeneID:
131254286
NCBI-ProteinID:
XP_058111262
LinkDB
All DBs
Position
8:65469541..65470469
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AA seq
282 aa
AA seq
DB search
MLPSRPSCVYRKPIRIGNVDSLNVESEFRIISGFLKDYPFISMDTEFPGVVYHNVPDTPD
SAARDRYALLRANINALKLIQVGLTFSDSASNLPDLGTNYCYVWQFNFNFDPWCDLHAPE
SIELLRKNGIDFERNRFYGIDEARFGFLMKLCGLVGNNCFSWITFHSAYDFGYLIKVVTQ
RELPDDTGEFLKLMKDIFGYKVYDIKYLMRFCHNLYGGLERVANELGVDRAVGKCHQAAS
DSLLTLHVFTRLKDRGFQLYVPDHCGVLYGLKYPLGNLFSLN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgctaccatcaagacctagttgtgtctacagaaaaccaattcgtatcggaaatgtggat
tcgttgaatgtggagtctgagttccgcataatcagcggcttcctcaaagactaccctttc
atctctatggacactgagttcccgggtgtcgtctaccataacgtgcccgatacacccgac
tctgcagccagggatcgatacgcactccttcgggcgaatataaacgcgctcaagctcatc
caagtcggactcactttctccgactcagccagcaaccttcctgatttggggaccaactac
tgttacgtctggcaatttaatttcaacttcgatccatggtgtgacctccacgcacccgaa
tcgatcgaactattgcgtaagaacggcattgacttcgagcgcaatcgattctacgggatt
gatgaggcccgtttcgggttcctcatgaagctatgcggacttgttgggaacaattgtttt
agttggatcaccttccacagtgcttacgactttggctatcttataaaggtggtcactcag
agggagctaccggatgacactggcgagtttctcaaattgatgaaagatatatttgggtac
aaggtttatgacataaaatatctcatgaggttctgtcacaacttatatggagggttggaa
cgtgtggccaatgaattgggggtggacagggctgttgggaaatgccaccaagctgcatca
gatagcctgctaacattgcatgtttttacgcggctcaaggatagaggttttcagctgtat
gtgcctgaccactgtggagtattgtatggattaaaataccctctgggaaatctgttttca
ttgaattga
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