Methanosarcina siciliae C2J: MSSAC_0073
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Entry
MSSAC_0073 CDS
T03863
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
msj
Methanosarcina siciliae C2J
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
HHH_8
Topo-V_HhH_2_2nd
HHH_3
UPF0758_N
DprA_N
Motif
Other DBs
NCBI-ProteinID:
AKB34663
UniProt:
A0A0E3PJ63
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Position
complement(96038..98497)
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AA seq
819 aa
AA seq
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MKHPLIKPDTVEQRLYQLNLAGKALEGSSLVVLPTGLGKTIIALFVIASRLQRFGGKALI
LSPTKPLVDQHAAFFKKVMNLPEEEILAFTGSIAPAEREKLWAQGKLIVSTPQVIENDLL
TKRISLEDVSHITFDEAHRAVGNYAYTFIAEKYFESAKNPHVLGITASPGSSDEKIAEVC
QALHVENVAVKTEKDRDVRPYVQEKEIEWLQVQLPAEMAEIRGYLEKILDDRLRIIRDLG
FSAGSGKYISKKDLLLLQKQLQGEIRVGGDPAIFSAMSVVAEMMKVNHAVEMVETQGIET
LRKYLEKLDAEASSKSASKASKRLMDDLYMRKALHRVKECDVEHPKLGLARKIVSEQLKE
NPDSRVIVFTNYRDTAEIVVNALSGVSGIIPIRFVGQGSRHKDKGLTQKQQAEILDKFRA
GEYNVLVATSVAEEGLDIPATDMVLFYEPIPSEIRSIQRKGRTGRQQKGRVIVLVTKGTR
DEAYYWSSKNKEKRMLNSMHGLESALTPKASKKSAALSDFENLPCTSDPQLKTEEIEIEK
EEEEEEGEGFENRTDLYSEKGSYPETGSGGNEQNEGNERINISAKERQKTLVDFGTASGD
NASESLKIVIDHRETKSGVAKTLDRLGMELSFVVLEIGDYVVSDRLAVERKRTDDFVSSL
IDGKRNLFSQLSDLARVYEKPVLIIEGEDLFTSRQINPNAIYGSLVSIAIDFGVSILYSR
DEAETASILKILAKREQTENKNEINPHGKKSASSLAEQQEYLISSISNIGPKAARNLLLH
FGSVEAIMRADIEELKKVKLIGPKTATRIREILESSYKG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatccgttgattaaacccgacacagttgagcagaggctttaccagctcaacctt
gcaggaaaagcccttgaaggttcaagccttgttgtgctccctacaggacttggaaaaacc
ataatagctctttttgtaattgcttcaaggctccagcgtttcgggggaaaagccctgatt
ctttcgcctacaaagccccttgtagaccagcatgctgcttttttcaaaaaggtgatgaac
cttcccgaagaagagattctggcttttacaggtagcatcgcccctgctgagcgggaaaag
ctctgggcgcagggaaagctgatagtatccaccccgcaggtgattgaaaacgaccttctt
acgaaaaggatcagccttgaggacgtaagccacatcacctttgacgaagcccacagggct
gttggaaattatgcttatacttttattgcggaaaagtactttgagagcgcaaaaaatccc
catgtgctcggaattaccgcaagtccgggcagctcggacgagaaaatcgcagaggtctgc
caggctttgcatgttgaaaacgtagccgtgaaaaccgagaaagacagggatgtccgccct
tatgtgcaggaaaaagaaattgagtggcttcaggtccagctccctgccgaaatggctgaa
atccggggctatctggaaaagatcctcgatgaccggctcagaatcataagggatctgggt
ttttccgcaggcagtggaaaatatatctccaaaaaagacctcctgcttcttcagaaacag
ctccagggagaaatccgtgtgggaggagaccctgctattttctctgccatgtctgtggtc
gccgagatgatgaaggtgaaccatgcagtggaaatggtggagacacagggaattgaaacc
ctcaggaagtacctcgaaaaactggatgcggaagcttcctcgaaaagtgcgagcaaggct
tcaaaaaggctcatggatgacctttacatgagaaaagccctgcacagggtaaaggaatgc
gatgttgaacatcccaaactcgggcttgcccggaaaatagtatccgaacagctgaaagaa
aaccccgattccagagtaattgtgtttacgaactacagggacactgccgaaatagtggta
aatgccctttccggggtttccgggattattccgatccgtttcgttggccagggttcgcgc
cataaggacaaagggcttacgcagaagcagcaggcggaaatcctggataagttcagggcc
ggagaatacaatgtactcgtagccacttcagttgctgaagaaggccttgatatccctgca
acggacatggtgttattttacgagcccataccctcggaaatccgcagcatccagcgtaag
ggcaggaccggcaggcagcaaaaaggccgggtaatcgtgctcgtgacaaaaggtacgcgg
gacgaagcctattactggagcagcaaaaacaaggaaaaaaggatgcttaatagcatgcat
gggcttgaaagcgcccttaccccaaaggcttcaaagaagagcgcagcgctttcggatttc
gaaaacctgccctgtacctcagacccacagttgaaaactgaagaaatagaaattgaaaaa
gaagaagaggaggaagaaggagaaggcttcgagaacagaacagatctatactcggaaaaa
ggatcatacccggaaacaggctctggtgggaatgaacagaatgaaggaaatgaaagaatc
aatataagtgcaaaagagaggcaaaaaacccttgtggatttcggaaccgcatccggagac
aatgcaagtgaatcactcaaaatagtgatagaccacagggagacaaaaagcggggttgca
aaaactctggacaggctcggtatggaactcagctttgtggttctcgaaataggagactac
gtggtaagcgaccgccttgcagtagaaagaaaacgcacggacgactttgtaagttctctg
atcgacggaaaaagaaaccttttttcccagctctctgaccttgcgcgggtgtatgaaaaa
cctgttctgattattgaaggggaagaccttttcacttccaggcagatcaaccctaacgct
atttacggctcacttgtatccattgcaatagactttggagtatccatcctttattccaga
gacgaggcagaaacagcttctattttgaaaatactcgcaaagagggagcaaacagaaaac
aaaaatgaaatcaatcctcacgggaaaaaatctgccagctcccttgcagaacagcaggaa
taccttatttcttctatttcgaatatcgggccaaaagccgcaagaaacctccttttgcat
ttcggctcggtagaagctattatgcgggctgatattgaagagctgaagaaagtaaaactg
ataggaccaaaaacagcaaccagaatcagagaaatcctcgaaagctcatataaaggataa
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