Mycobacterium spongiae: F6B93_18440 Help Entry F6B93_18440       CDS       T07689                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism mspg  Mycobacterium spongiae Pathway mspg03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:mspg00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     F6B93_18440  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mspg03400]     F6B93_18440 Enzymes [BR:mspg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      F6B93_18440 DNA repair and recombination proteins [BR:mspg03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      F6B93_18440 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S RNA_ligase Motif Other DBs NCBI-ProteinID:  QUR68792 UniProt:  A0A975JZW3 LinkDB All DBs Position complement(4534152..4536485) Genome browser AA seq 777 aa AA seqDB search MGSARVWPPGRQDAPSVTLTNADKVLYPATGTTKADIFDYYTGIAEVMVPHIAGRPATRK RWPNGIDEAAFFEKQLASSAPAWLPRASITHRSGTTTYPIIDSATGLAWIAQQAALEVHV PQWRFVAEWTRSGESVKPGPTTRLVFDLDPGDGVTMAQLATVARAVRDLIADIGLTTFPV TSGSKGLHLYTPLDEPVTSRGATVLAKRIAQQLEKSMPTLVTSAMTRSLRVGKVFLDWSQ NSGSKTTVAPYSLRGQEHPTVAAPRDWEELDDASLAQLSYGEVLARVARDGDLLAPVDPP DAEAPVGDRLTTYRSMRDGSKTPEPVPRSKPATGQNNTFVIQEHHARRLHYDFRLERDGV LVSWAVPKNLPETSSVNHLAVHTEDHPLEYATFEGDIPKGEYGAGRVTIWDSGTYDTEKF RDAPRIGSEKGSKKGEVIVNLHGRRISGRYALIQTNGDQWLAHRMKDQKVFDFDDISPML ATHGSVAGLKAGQWAFEGKWDGYRLLVEVDHKNFRLRSRSGRDVTTEYPELRSLAADLAD HHAVFDGEVVALDDAGVPSFNELQNRVRATRIQFWAFDLLYLDGRSLLRARYSDRRKLLE TLGKASDLIVPELLPGDGKRALEYSNNRGWEGVIAKKRDSSYQPGRRSSSWLKDKHWKTQ EVVIGGWRAGEGGRSGAIGSLLLGIPDGQGLHFAGRVGTGFTERDLANLKTILAPLHTDE SPFDELLPAGDAKGVTFVEPTLVGEVRYSEWTPDERLRQSSWRGLRPDKKPDEVVRE NT seq 2334 nt NT seq  +upstreamnt  +downstreamnt atgggttcggcgcgagtgtggcctcctggtcgccaggacgccccatcggtgacactgacc aacgccgacaaggtgctgtacccagcgaccggcacgacaaaggccgacattttcgactac tacaccggcatcgccgaggtgatggtgccgcacatcgccgggcgcccagcaacgcgcaaa cgctggcccaacggcatagacgaggccgcattcttcgaaaagcagctggcatcctcggca cccgcctggctgccgcgggccagcatcacgcaccgctccgggacaaccacctatccgatc attgacagcgccaccggcctcgcctggatcgcgcaacaggcagctctcgaggtgcacgtg ccgcagtggaggttcgtggccgagtggacccgaagcggcgagagtgtgaaacccggcccg acaacgcgattggtgttcgacctggacccgggtgacggcgtcacgatggcccaactggcc acggtggcgcgtgctgtccgcgacctcatcgccgatatcggcctgacgaccttcccggtt accagcggcagcaaagggctacacctctacacgccgctcgacgaaccggtgaccagcagg ggcgccacggtgctagccaaacgcattgctcagcaactggagaaatcgatgccgacgttg gtcacgtcagcgatgacgcggagcctgcgcgtgggaaaggtgttcttggactggagccag aacagcggatcgaagaccaccgttgcgccgtattcgctacgcgggcaggagcatccgacg gtcgcggcgccgcgtgattgggaagaactcgacgatgcttcgctggctcaactgagctat ggggaggtcctggcccgggtcgcccgcgacggggacctgctcgcgccggtggatcccccg gatgctgaagcccccgtgggcgaccggctgaccacataccggagcatgcgcgatggctcg aagacccccgagccagtgccgagatcgaaacccgctaccggccagaacaatacatttgtt attcaggagcaccatgcccgccggctgcactacgactttcggctggagcgagacggcgtg ctggtgtcatgggcggtgccgaaaaacctgcccgagaccagctcggttaaccatctggcg gtgcacaccgaggatcatccgctcgaatacgccaccttcgaaggcgacattcccaaaggg gagtacggcgccggcagggtaacgatctgggactctgggacctacgacaccgagaagttc cgcgacgcgccccgaatagggtctgagaagggatccaaaaagggagaagtgattgtcaac ctgcacggtcgccggatctcgggacgctatgcgctgattcagaccaacggcgaccagtgg ctggcacaccgcatgaaagaccaaaaggtcttcgacttcgacgatatctctccgatgctc gcaacgcatggctcggtggcgggtttgaaagccgggcagtgggccttcgaaggcaagtgg gatggctaccggctgctggtcgaagttgaccacaaaaactttcgcctgcgctcccgcagt ggccgcgatgtcaccacggagtaccccgaattacgttcgctagcagcggatcttgcggat caccatgccgtgttcgacggtgaggtggtcgcgctcgacgacgccggtgtaccgagcttc aacgagttgcaaaaccgggttcgcgccacccggatccaattctgggcgtttgacctgctc tatctcgacggtcgctccctgctgcgggcgcgctactctgaccggcgcaagctgctcgaa acattaggtaaagcaagcgatctcattgtccccgagctgttgcccggagacggcaagcgg gcgctcgagtactcgaacaaccgaggctgggagggcgtgatcgccaagaaacgcgactcg agttaccagccgggccgacgctcgtcgtcgtggctcaaagacaagcattggaagacgcag gaagtcgtcatcggaggctggcgagccggtgaaggggggcgcagcggcgccatcgggtcg cttctcctgggcattcccgacgggcaagggctgcatttcgccgggcgtgttggtaccggt ttcaccgaacgcgacctggccaacctcaaaacgatactggcgccgctgcataccgacgaa tctccgttcgacgaactgctgccggcgggtgacgccaaaggagtcactttcgtcgaaccg acactggtcggcgaggtgcgctacagcgagtggactcccgatgagcggttgcggcaatca agttggcgcgggctgcggccggacaagaaaccagatgaggtggtacgcgaatga

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