Marinobacter salinus: BKP64_15185
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Entry
BKP64_15185 CDS
T04766
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
msq
Marinobacter salinus
Pathway
msq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BKP64_15185
09124 Replication and repair
03420 Nucleotide excision repair
BKP64_15185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msq03021
]
BKP64_15185
03400 DNA repair and recombination proteins [BR:
msq03400
]
BKP64_15185
Enzymes [BR:
msq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BKP64_15185
Transcription machinery [BR:
msq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BKP64_15185
DNA repair and recombination proteins [BR:
msq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BKP64_15185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AOY89402
UniProt:
A0A1D9GP40
LinkDB
All DBs
Position
complement(3259173..3261416)
Genome browser
AA seq
747 aa
AA seq
DB search
MKVAVRTLCEFAAREGDLDFRYTPAPSAEEGITGHQAIQSRRGYGYKSEYLLTGECLGLE
LSGRADVYNPHRGRLEEIKTHRGDLSRIREHQRALHRAQLRAYGALLCRQESRKKLELAL
IYYDTGKDKETPVVETASAGELWQELENLCGLYKAWAEQEAHHREQRDALLAGLTFPFPE
FRPRQRQLAETVYKNAMKSGTLLLEAPTGLGKTLGTLFPALMAMPSARQDRLFYLTCRNT
ARQLAMDAVTRLRLAQTVPNWPLRTLELVSKNDACEHPDKACHGDSCPLAKGFFDRLPDA
RAEAARTEGILNQDTLAKIAAGHDICPYFLAQEMARWSDVVIGDVNRLFDQSALLHGLTR
QNNWKVSVLVDEAHNLVDRGRGMYSVRLDQQRLLRTKKTAPKPLKSSIDRAARSWQSLIR
DHQADHEKPVFLESLPAQLLGALQAMVSSLTDYLADNPPDLALQELLFESVAFMRLAESF
GDHSLCEFQRAGRGRASLTIQNLIPADFLRERFEVAHSVLLFSATLSPGIYYRDLLGLPE
DSRFISLPSPFTADQLQVHFTPGISTRQAHRQASAEPIAELVAQQYRQRPGHYLAFFSSF
KYLNDVSEALAREAPDVPQRSQQPGMSPQQRATFLAEFREGRGSVAFAVLGGVFSEGIDL
PGDQLIGAFVATLGLPPFDPWHEILKERLQQRFGAGYDYTYLIPGLQKVAQAAGRVIRTP
EDQGVIWLIDDRFLKPPVRNLLPGWWF
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtagccgtccgcaccctttgtgagtttgccgcccgcgaaggcgatctggatttc
cgttatacgccggcacccagtgccgaggagggcatcaccggccatcaggcaatccagtcc
cggcgcggctatggctataaaagcgagtatttacttactggtgaatgtttggggttggag
ctttcagggcgagccgacgtctataatccacatcgtggccggctggaagaaatcaagacc
caccgaggtgatctgtcccgcattcgagagcatcagcgggcgctccaccgggcccagttg
agggcctacggtgccctgctgtgccggcaggaaagtcggaaaaagctggaactggcgctg
atttattacgacaccggcaaggacaaggaaacgccggtggtggaaaccgccagcgccggg
gaactctggcaggaactggaaaacctgtgtggcctctacaaggcctgggccgaacaggaa
gcgcaccaccgggagcaacgggatgccctgcttgccggccttacgtttcccttccctgaa
ttccgacccagacagcgtcaactggccgagaccgtttacaagaatgcgatgaaatcgggc
accctgctgctcgaggctccgacgggtctgggcaaaaccctgggcaccctgttcccggcg
ttaatggcgatgccgtcggccaggcaggaccggcttttctaccttacctgccgaaacacg
gcgcgccagctggccatggatgcggtgacgcggctgcgattggcccagactgtcccgaac
tggcccctgagaaccctggaactggtgtcgaaaaacgacgcctgtgaacatccggacaag
gcctgccatggtgactcttgccctctggcgaaaggcttcttcgaccggttaccggacgcc
cgggccgaagcagcgcggaccgagggtatcctgaatcaggacaccctcgcgaaaatcgct
gccggtcacgacatctgcccctattttctggcccaggaaatggctcgttggagcgatgtg
gtgatcggtgatgtgaaccggctgttcgaccagtctgccctgctccatggtctgacccgc
cagaataactggaaggtcagtgtattggtggatgaagcccacaacctggtagaccggggc
cggggcatgtattccgttcggctggatcagcaacgactgctgaggaccaagaaaacagca
cccaagccgctgaagtcgtcgatcgaccgcgcagcccggtcgtggcagagcctgattcgg
gatcaccaggccgatcacgaaaaacctgtgtttctcgagtctctgcccgcccagctgctt
ggcgccctgcaggcgatggtttccagcctgaccgattacctggccgacaatccaccggac
ctggcgcttcaggaactgctgttcgagagcgtggccttcatgaggctggcggagtccttc
ggggatcactccctgtgtgagttccagcgggccggccggggccgggccagcctgactatc
cagaacctgataccggcggacttcttgcgggaacggtttgaggtggcgcactcggtgctg
ctgttctcagcaaccctgagccccgggatctattatcgggatctgctgggcctgcccgaa
gacagccgctttatctctctgcccagcccgttcacggcagatcagctacaggtgcatttc
acgcccgggatcagtacccgccaggcacaccggcaggcgtcggctgaacccattgccgag
ctggtcgcacagcagtaccggcagcggcccggccactatctggcgtttttcagcagtttc
aaatacctgaatgatgtcagtgaggcgcttgcccgggaagcgccggatgttccgcaacgg
tcccaacagccgggtatgagcccacagcaacgcgccacgtttctggcggagttccgggaa
ggtcgcggcagcgtggcgttcgcggttctgggtggggtattcagtgaaggcatcgacctg
cctggggaccagttgatcggagcctttgtcgccaccctcggcctgccaccgtttgaccct
tggcatgagattctcaaggagcgactgcagcaacgatttggtgcgggatatgactacacc
tacctgattccgggcctgcaaaaagtggcccaggcggctggccgggtgattcggacgccg
gaggatcaaggggtgatctggctgattgacgaccgttttctcaagccaccggttcggaat
ctgttacccggctggtggttttag
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