Mannheimia succiniciproducens: MS1740
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Entry
MS1740 CDS
T00201
Name
(GenBank) unknown
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu00040
Pentose and glucuronate interconversions
msu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
MS1740
Enzymes [BR:
msu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
MS1740
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Motif
Pfam:
Pectate_lyase22
Peptidase_S9_N
PD40
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
AAU38347
UniProt:
Q65RR3
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Position
complement(1730679..1731857)
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AA seq
392 aa
AA seq
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MEVVIMAKGKKIQLTFESFIDSDTNVKVTRLTPKDVTCHRNYFYQKCFTQDGKKLLFAGD
FDGNRNYYLLDLQSQEAIQLTEGKGDNTFGGFISHDDKFFFYVKNESSLRKVDLATLEEK
VIYTVDENWKGYGTWVANSDCTKLVGIEILKSCWQPLTDWDKFKAFYHTNPTCRLIKVDI
LTGDLEVVLQDNVWLGHPTYRPFDDSIVGFCHEGPHDLVDARMWFVNEDGTNVRKAKEHQ
EGESCTHEFWVPDGSKMIYVSYFKGQTERVIYSVDPNTLENTRLITMPPCSHLMSNFNGN
LLIGDGCDSPVDVADSDSYNIENDPFLYLFNIEKQRTVKLAKHSSSWQVLDGDRQITHPH
PSFNPNDSAVLFGSDFEGRPAIYLADISQLKD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtaattatggcgaaagggaagaaaattcaacttacttttgaatcctttatt
gattcggatactaatgtaaaagtaacacgattaacaccaaaagacgtgacttgtcaccgc
aattatttttaccaaaagtgtttcactcaagacggcaaaaaattgctttttgcaggagat
tttgacggcaaccgcaattattatttacttgatcttcagagtcaggaagctattcagtta
accgaaggaaaaggcgataatacgttcggcggctttatttcccatgatgataaattcttt
ttctatgtgaaaaatgaatcaagtttgcgtaaagtggatttagcaactttagaagaaaaa
gtgatttataccgtagatgaaaactggaaaggctacggcacatgggtggcaaattccgat
tgtacgaaattggtcggtattgaaatcttaaaatcctgctggcaaccattaacggattgg
gataagtttaaagctttctatcataccaatcctacttgccgattaattaaagttgatatt
ttaaccggtgatttagaggtggttcttcaagataacgtctggttaggacacccgacttat
cgcccgtttgatgacagtattgtcggtttttgccatgaaggcccgcatgatttagtggat
gccagaatgtggtttgttaatgaagacggcacaaatgtgcgcaaagcgaaagaacatcaa
gaaggtgagtcctgtacccatgaattttgggtgccggacggctcaaaaatgatctacgtt
tcttatttcaaagggcagactgaacgagtaatttacagtgtagatcctaatacattggaa
aatacgcgcctgattaccatgccgccttgctctcatttaatgagtaattttaatggtaat
ctgcttattggcgacggttgcgattctccggtggatgtagcggatagcgacagttataac
attgaaaacgatccgtttttgtacctgttcaatattgaaaaacaacgtaccgttaaattg
gctaagcatagttcttcctggcaggtattggatggtgatcgtcagattacgcaccctcat
ccttcttttaatcccaatgactccgccgtattattcggtagtgattttgaagggagaccg
gcgatttatttagcggatatcagccaattaaaagattaa
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