Metamycoplasma subdolum: R9C05_02690
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Entry
R9C05_02690 CDS
T09522
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
msud
Metamycoplasma subdolum
Pathway
msud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R9C05_02690 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msud03400
]
R9C05_02690 (uvrB)
DNA repair and recombination proteins [BR:
msud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R9C05_02690 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R9C05_02690 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
UvrD_C
Kinesin
Helicase_C_2
AAA
AAA_16
AAA_7
AAA_30
P-loop_SecA
DUF87
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WPB50491
LinkDB
All DBs
Position
603023..605029
Genome browser
AA seq
668 aa
AA seq
DB search
MNKFILHSKFQPAGDQPEAIKSLVEGINDGKQHQVLLGVTGSGKTFTIANVIEKLNRPTL
IISHNKTLASQLYSELKEFFPENRVEYFISYFDFYKPEAYIPTADLYIEKTAKNNKELEA
MRMSAINALTIRKDTIVVASVAAIYGEFNPYEYRANFFDIEVGMKVDRRFILNKLNMIGY
SRNDVELNIGELSVKGDTIYIAPGYTTDFWIRIEMFDDEIEAISKINPTTRDILEKGKVN
NITVFPATTYTVNMNRKREMISEIKEELEERIAYFKSENKLIEAQRIKERVLNDLDSIQE
FGYTSGMENYARYLDGRKPGERPYTIFDYLPHDAMIFIDESHMMIPQLNGMFNGDRSRKE
TLVEYGFRLPSALDNRPLRFHEFEEFHFPKIYLSATPGEYELNKTEGEVVTQYIRPTGLL
DPIIEVNQTEYVVFDIFEKIQQQIKKKERTLILTTTKKRAEELSTYFKERKIKSAYIHDQ
FKIFERNEILRGLRSGKFDVVIGINLLREGIDLPEVSLVCILDADSHGFMRNTRSLIQIV
GRAARNDHGKVIFYAQNFTEAMVETIQDNENKRKIQQEYNEKHGIVPKTIIKDIPKPISG
IKFEDVLDDAEGKVYNRKYIKRLVREMNQASKERNFEKAIEIRDHLFEIGIDLEEFKSDK
HNSDNKKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttattttgcatagtaagtttcagccagcaggagatcaaccagaagctatt
aaatctttagttgaaggcattaatgatggaaagcaacatcaagtacttttaggagtaact
ggttcaggtaaaactttcacaattgctaatgttattgaaaaattaaatcgcccaactttg
ataatttcacataataaaactttagcttctcaactttactcagaacttaaagaatttttt
cctgaaaacagagttgaatattttatttcttattttgatttttataaaccagaagcgtat
attccgactgctgatttatatattgaaaaaacagcaaaaaataataaagaacttgaagca
atgagaatgagtgcaattaatgctttgacaattagaaaagacactattgttgtagcaagt
gttgctgcaatttatggtgagtttaatccttatgaatatcgtgctaatttttttgatata
gaagttggtatgaaagttgatagaagatttattttaaataaactaaatatgattggttat
tcaagaaatgatgtggaattaaatataggagaacttagcgtaaaaggagatactatttac
attgctccaggatatacaactgatttttgaatacgtattgaaatgtttgatgatgagatt
gaagcaatttccaaaataaaccctaccacaagggatattttagaaaaaggcaaggtcaat
aatattactgtttttccagcaacaacttatacagtaaacatgaatagaaaaagagaaatg
attagtgaaatcaaggaagaacttgaagaaagaattgcttactttaagagcgaaaataaa
ttaatagaagctcaaagaattaaagaaagagttttaaatgatttagactcaattcaagag
tttggttacacttctggaatggaaaattatgccagatatttagatggaagaaaacctgga
gaaaggccttatactatctttgattatttacctcatgatgccatgatttttattgatgaa
agtcatatgatgataccgcaacttaatggtatgtttaatggcgatagatcaagaaaagaa
actttagtagaatatggatttagattgccttctgcacttgataatagacccttgagattt
cacgaatttgaagagtttcattttccaaaaatttatctttcagcaactccaggagagtat
gaacttaataagacagaaggagaagttgttactcaatatatacgcccaacaggcttgtta
gatcctatcatcgaagtaaatcaaaccgagtatgttgtgtttgatatttttgaaaaaatt
caacaacaaattaagaaaaaagaacgtactttaattttaaccacaactaaaaaaagagca
gaagagctttcaacgtatttcaaagaaagaaaaataaaatcagcttatattcatgaccag
ttcaaaatctttgaaagaaatgaaattttaagagggttaagatcaggaaagtttgatgtt
gtaattggaattaacttacttcgtgaaggaatagatttgcccgaagtaagtttagtttgc
attttagatgcagatagtcatggttttatgagaaacactagaagtttaattcaaatcgtt
ggtcgtgccgccagaaatgatcatggaaaagttatattttatgctcaaaatttcacagaa
gcaatggttgaaactattcaagataatgaaaacaaaagaaaaatccaacaagaatataat
gaaaaacacgggattgttcctaaaacaattatcaaagatataccaaaaccaattagtgga
atcaagtttgaagacgtactagatgatgctgaaggcaaagtttataacagaaaatatatc
aagagacttgttagagaaatgaaccaagcaagcaaagaaagaaactttgaaaaagcaatt
gaaattcgcgaccatttgtttgaaattggtattgatttagaagaatttaagtcggataaa
cataatagtgataacaaaaagtcttag
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