KEGG   Metamycoplasma subdolum: R9C05_02690
Entry
R9C05_02690       CDS       T09522                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
msud  Metamycoplasma subdolum
Pathway
msud03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    R9C05_02690 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msud03400]
    R9C05_02690 (uvrB)
DNA repair and recombination proteins [BR:msud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     R9C05_02690 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      R9C05_02690 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_22 UvrD_C Kinesin Helicase_C_2 AAA AAA_16 AAA_7 AAA_30 P-loop_SecA DUF87 AAA_5
Other DBs
NCBI-ProteinID: WPB50491
LinkDB
Position
603023..605029
AA seq 668 aa
MNKFILHSKFQPAGDQPEAIKSLVEGINDGKQHQVLLGVTGSGKTFTIANVIEKLNRPTL
IISHNKTLASQLYSELKEFFPENRVEYFISYFDFYKPEAYIPTADLYIEKTAKNNKELEA
MRMSAINALTIRKDTIVVASVAAIYGEFNPYEYRANFFDIEVGMKVDRRFILNKLNMIGY
SRNDVELNIGELSVKGDTIYIAPGYTTDFWIRIEMFDDEIEAISKINPTTRDILEKGKVN
NITVFPATTYTVNMNRKREMISEIKEELEERIAYFKSENKLIEAQRIKERVLNDLDSIQE
FGYTSGMENYARYLDGRKPGERPYTIFDYLPHDAMIFIDESHMMIPQLNGMFNGDRSRKE
TLVEYGFRLPSALDNRPLRFHEFEEFHFPKIYLSATPGEYELNKTEGEVVTQYIRPTGLL
DPIIEVNQTEYVVFDIFEKIQQQIKKKERTLILTTTKKRAEELSTYFKERKIKSAYIHDQ
FKIFERNEILRGLRSGKFDVVIGINLLREGIDLPEVSLVCILDADSHGFMRNTRSLIQIV
GRAARNDHGKVIFYAQNFTEAMVETIQDNENKRKIQQEYNEKHGIVPKTIIKDIPKPISG
IKFEDVLDDAEGKVYNRKYIKRLVREMNQASKERNFEKAIEIRDHLFEIGIDLEEFKSDK
HNSDNKKS
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgaataaatttattttgcatagtaagtttcagccagcaggagatcaaccagaagctatt
aaatctttagttgaaggcattaatgatggaaagcaacatcaagtacttttaggagtaact
ggttcaggtaaaactttcacaattgctaatgttattgaaaaattaaatcgcccaactttg
ataatttcacataataaaactttagcttctcaactttactcagaacttaaagaatttttt
cctgaaaacagagttgaatattttatttcttattttgatttttataaaccagaagcgtat
attccgactgctgatttatatattgaaaaaacagcaaaaaataataaagaacttgaagca
atgagaatgagtgcaattaatgctttgacaattagaaaagacactattgttgtagcaagt
gttgctgcaatttatggtgagtttaatccttatgaatatcgtgctaatttttttgatata
gaagttggtatgaaagttgatagaagatttattttaaataaactaaatatgattggttat
tcaagaaatgatgtggaattaaatataggagaacttagcgtaaaaggagatactatttac
attgctccaggatatacaactgatttttgaatacgtattgaaatgtttgatgatgagatt
gaagcaatttccaaaataaaccctaccacaagggatattttagaaaaaggcaaggtcaat
aatattactgtttttccagcaacaacttatacagtaaacatgaatagaaaaagagaaatg
attagtgaaatcaaggaagaacttgaagaaagaattgcttactttaagagcgaaaataaa
ttaatagaagctcaaagaattaaagaaagagttttaaatgatttagactcaattcaagag
tttggttacacttctggaatggaaaattatgccagatatttagatggaagaaaacctgga
gaaaggccttatactatctttgattatttacctcatgatgccatgatttttattgatgaa
agtcatatgatgataccgcaacttaatggtatgtttaatggcgatagatcaagaaaagaa
actttagtagaatatggatttagattgccttctgcacttgataatagacccttgagattt
cacgaatttgaagagtttcattttccaaaaatttatctttcagcaactccaggagagtat
gaacttaataagacagaaggagaagttgttactcaatatatacgcccaacaggcttgtta
gatcctatcatcgaagtaaatcaaaccgagtatgttgtgtttgatatttttgaaaaaatt
caacaacaaattaagaaaaaagaacgtactttaattttaaccacaactaaaaaaagagca
gaagagctttcaacgtatttcaaagaaagaaaaataaaatcagcttatattcatgaccag
ttcaaaatctttgaaagaaatgaaattttaagagggttaagatcaggaaagtttgatgtt
gtaattggaattaacttacttcgtgaaggaatagatttgcccgaagtaagtttagtttgc
attttagatgcagatagtcatggttttatgagaaacactagaagtttaattcaaatcgtt
ggtcgtgccgccagaaatgatcatggaaaagttatattttatgctcaaaatttcacagaa
gcaatggttgaaactattcaagataatgaaaacaaaagaaaaatccaacaagaatataat
gaaaaacacgggattgttcctaaaacaattatcaaagatataccaaaaccaattagtgga
atcaagtttgaagacgtactagatgatgctgaaggcaaagtttataacagaaaatatatc
aagagacttgttagagaaatgaaccaagcaagcaaagaaagaaactttgaaaaagcaatt
gaaattcgcgaccatttgtttgaaattggtattgatttagaagaatttaagtcggataaa
cataatagtgataacaaaaagtcttag

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