Methanosarcina siciliae T4/M: MSSIT_1025
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Entry
MSSIT_1025 CDS
T03865
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSSIT_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_1025
Enzymes [BR:
msw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSSIT_1025
DNA repair and recombination proteins [BR:
msw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSSIT_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AKB27744
UniProt:
A0A0E3P2Q4
LinkDB
All DBs
Position
complement(1253308..1254156)
Genome browser
AA seq
282 aa
AA seq
DB search
MYRLKPEIFNLDYTLDCGQVFRWEKSGDWWTGVVGDHVIRLSQEEDSGDLLIDSQLPPEF
FSYYFRLDDNLPSIYESINKDLLINRAINKYSGLRLIRQNPWECLISYMLATASSIPTIQ
KRIYLLSRFFGQELEEGYFSFPDPGTLAEADLSLLDKCKLGFRTERIKEAAREVASDELD
LNVLYRLEYRYARERLMRLRGIGEKVADCVLLFAFEKMEAFPVDTHVRQIIQHYHIDDSY
FETCTNMSCMGEWGRKYFGYYCGYAQQYLFYQKRLEGFVSLY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggcttaagcccgagatcttcaacctggactacacccttgactgcggacaggtc
ttccgctgggaaaagtcaggagactggtggacaggcgttgtaggagaccatgttatccgg
ctttcgcaggaggaggacagcggagatctgctgatcgattcccaacttccccccgaattt
ttctcttactatttccgcctggacgacaacctgccttcgatctacgaaagcataaacaaa
gacctcctgataaacagggcgatcaacaaatacagcgggcttcgcctgattcggcagaac
ccctgggaatgcctgatctcttatatgctcgcaacagcttcaagcatccccacaattcag
aaacgaatctatcttctgagccgctttttcggccaggaactcgaagaaggctatttcagt
ttccctgatcccggtacccttgcagaagccgacctttccctgcttgacaaatgcaaactc
ggctttcggaccgaacgcataaaagaagcggcaagagaagtggcttcagacgaacttgac
cttaacgtcctctaccgcctggaatacaggtacgccagggaacgcctcatgaggcttcgc
ggcatcggggaaaaagttgccgactgcgtcctcctgttcgcctttgagaaaatggaagcc
ttcccggttgatacccatgtcaggcagatcatccagcattaccatatcgatgacagctac
tttgaaacctgcacgaacatgagctgtatgggagaatggggacggaaatacttcggctat
tactgtgggtatgctcagcagtatttgttttatcagaaaaggctggagggttttgtttcg
ctgtattaa
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