KEGG   Methanosarcina siciliae T4/M: MSSIT_1111
Entry
MSSIT_1111        CDS       T03865                                 
Name
(GenBank) RNase L inhibitor
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
msw  Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:msw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msw03009]
    MSSIT_1111
Ribosome biogenesis [BR:msw03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    MSSIT_1111
SSDB
Motif
Pfam: ABC_tran SMC_N RLI AAA_21 Fer4 Fer4_6 Rad17 AAA_22 AAA_16 Fer4_21 Fer4_7 RNA_helicase Fer4_2 Fer4_9 NACHT AAA Fer4_10 Fer4_4 VapE-like_dom RsgA_GTPase KAP_NTPase AAA_33 Fer4_8
Other DBs
NCBI-ProteinID: AKB27830
UniProt: A0A0E3P343
LinkDB
Position
1358012..1359778
AA seq 588 aa
MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIIFEEDGKPVISEELCVGCGICINKCP
FDAIMIIGLPEALQEPTHRYGPNGFALFGLPVPRIGKVSGILGPNGIGKSTSVQILSGTL
IPNFGQGKGDWDTVLEHYAGTALHDYFKDVVDGKVKVSQKPQYVDLIPKAFKGKTSELLE
KTDEKGVLDELIDRLDLKGVIERKISELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
YQRINVARLIQEISKDRAVLVVEHDLAILDMLTDVVHIAYGEPAGFGVVTLPKSVRVGIN
QYLKGYLPEENIRIRPESIRFEVHPPREDAQFQSMISFNSFSKQYGDGFSLKATGGSLRE
GEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIDVKISYKPQYIKADTPVSVQDFLRGI
TKRFGTSYYEVEIAAPLQLERIYESLLTDLSGGELQRVAIAACLSQEADLYILDEPSAHL
DVEQRSMVTKVINRFAENNQKTAMVVDHDIYMIDMLSQRLLVFEGESSVYGEANGPFSME
KGMNRFLKNLGITFRRDEETRRPRVNNLGSRLDREQKENGNYYYSAKD
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagaatagctatacttaacaaagacaggtgccagcccagaagatgcagtaaggagtgc
gaaaaatattgtcctagagtcaggacaggagacgaaaccattatttttgaggaagatggc
aagccggtcatctccgaagaactatgtgttggttgcgggatatgcattaacaaatgtcct
ttcgatgccatcatgatcatagggcttcctgaagctctgcaagagcccacgcacaggtac
gggccaaacggttttgctcttttcgggcttccagtgccgaggatagggaaggtatccggt
attttgggcccgaacgggatagggaagagtacctctgtccagattctttccggaactctg
atccctaacttcgggcagggaaaaggagactgggatacggtattagaacactatgcgggg
actgcgcttcatgactatttcaaagatgtagtggacggaaaggtaaaggtttcccaaaaa
ccccagtacgttgaccttatccccaaagctttcaaaggcaagacctccgagctgcttgaa
aaaaccgatgaaaagggggttctggacgaactcatcgaccgtcttgacctgaaaggcgta
atcgagcgaaaaatttcggaattgagtggtggggaacttcagagagttgcaattgcagcc
tgtgcggcaagagatgcccagttttatttctttgacgaaataagcccttacctcgacata
taccagaggattaacgttgcccgtctgattcaggaaatctcaaaggacagggcagttctt
gtagtcgagcacgaccttgcgatcctggacatgcttacggacgtcgttcacatagcttac
ggtgaacccgcaggattcggtgtggtcactctcccgaaaagtgtgcgagtcggaatcaat
cagtaccttaaaggctacctccctgaagaaaatatccggatccggcccgaatccatcagg
ttcgaggtccatcccccgagagaggacgcccagttccagtctatgatctcctttaacagc
ttctcaaagcagtatggggacggcttctctctcaaggcaaccggcggaagcctgcgggaa
ggggaagtgctcgggatagtcgggcctaacgggataggaaaatcaacatttgtaaaagtc
ctggcaggggaaatcaagccagatgaaggggatccgggaattgatgttaaaatttcctac
aagccccagtatattaaagccgatactcctgtaagtgtccaggactttctgaggggaatt
acaaagcgtttcgggaccagctactatgaggttgagattgcagctcccctccagcttgaa
agaatctatgaaagcctgcttaccgatctgagtggtggagaactgcagagggtggcaatt
gccgcctgcctgtcccaggaagccgacctctatatcctggacgagccgagtgctcacctt
gatgtggagcagcgttctatggtcaccaaagtcatcaaccgctttgccgaaaacaaccag
aagacagctatggttgttgaccacgatatctatatgatcgatatgctcagccaacgcctc
cttgtttttgaaggcgagtcttctgtctacggtgaagccaacgggcctttcagcatggaa
aaaggcatgaataggttcctgaaaaacctcggcatcactttccgcagggatgaagaaacg
aggcgtccccgtgtaaacaacctcggctcaaggcttgaccgggagcagaaggaaaacgga
aactactattattccgctaaagactga

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