Methanosarcina siciliae T4/M: MSSIT_1554
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Entry
MSSIT_1554 CDS
T03865
Name
(GenBank) Transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msw03000
]
MSSIT_1554
Transcription factors [BR:
msw03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MSSIT_1554
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
AHJR-like
HK_sensor
Motif
Other DBs
NCBI-ProteinID:
AKB28273
UniProt:
A0A0E3P416
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Position
complement(1936562..1937224)
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AA seq
220 aa
AA seq
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MEIQQNSGRVSSLRGGPVRSFTDEEREIIKRKIIDRGKDCFSRYGIKKTGIEDLTEGLGI
SKSSFYSFFISKEDLFLQIFKEEKEALKDNILENSFLKYRTEPDKAIRAYLRYVLDIVDN
HPIWRKVLIEKEQFELTISRSSEEELKNIRRDNVAIILPFFEEWEEAGLLIDKPARILAE
TTQTVLSFIHFRNEIEDEDFSEIMEIFIDLIADNIVKKSS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccagcaaaactctggaagagtttcttccttaagaggtgggcctgtgcggtct
tttacggatgaagaaagagagatcataaaaagaaaaattatagaccggggaaaggactgc
ttttccaggtacgggattaagaaaacaggcattgaagaccttaccgagggtctggggatt
tcgaagagttctttttattccttttttatcagtaaggaagatctttttctgcagatcttt
aaggaggaaaaagaggctttaaaggacaacatactcgaaaattccttcctgaaatacagg
acggaacccgataaggcgataagggcttatctccgctacgtgctggatatcgtagataac
catccgatctggagaaaagttttaattgagaaagaacagtttgaactcacaatttcccgg
tcttcggaggaagaactcaaaaatattcgtagagacaacgtggcaataattcttcctttt
tttgaagagtgggaagaagccgggcttcttattgacaagcccgcccggattcttgcagag
accacacagacggttctttcctttattcacttcagaaacgaaatcgaggacgaagatttt
tccgaaattatggagatctttatcgatctgatagcagacaatattgtaaaaaagagttca
tag
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