KEGG   Malus sylvestris (European crab apple): 126583548
Entry
126583548         CDS       T09027                                 
Name
(RefSeq) uncharacterized protein LOC126583548
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    126583548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126583548
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     126583548
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert PLDc
Other DBs
NCBI-GeneID: 126583548
NCBI-ProteinID: XP_050103919
LinkDB
Position
9:2071286..2076038
AA seq 472 aa
MGAYNNDRVFSPIYSFASSQDVRLSKHVHDSVHGNIYLDALSLKFIDTEEFQRLRELKQL
GMTHMVYPGATHSRFEHSLGVYWLAGEAAQRLKIYQGSELDIDRFDIQTVKIAGLLHDVG
HGPFSHLFEREFLPQVRSGSHWSHEHMSAKMVDHIVNQHHIDIDSEMVKRVKEMILASSE
FAVPKSSREKPFLYEIVANGRNGIDVDKFDYILRDCRNCGLGLNFEYQRLMETMRVLDDE
ICYRAKDYLTVHKLFATRADLYRTVYTHPKVKAIELMVVDALVKANDFLDIASRIEDPSQ
YWKLDDTIIRTIETAPNEELKEARDLILRIRRRNLYQFCNEYSVPKEKMEHFKNVTAQDI
VCSQKNGGVTLKEEDVTVSNVRIDLTRGRHNPLESISFFQDYNSHEKFTISDDRISHLLP
TSYQDMIVRVYSKKPELVGAISEAFENFQLKTYGIKAQIHATPEKKKRRILA
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggggcgtacaacaacgaccgtgttttttcgccgatatacagcttcgcctcctctcaa
gacgtccgtctctcgaagcacgtgcacgacagtgtccatggcaacatttacctcgacgcg
ctttcgttgaagtttatcgataccgaggagtttcagaggcttcgggagttgaagcaactc
ggaatgacacacatggtttatccaggggccacacattccaggtttgagcattcgcttggt
gtctattggcttgctggtgaagctgcacagaggcttaaaatttaccagggttcggagctg
gatattgaccgatttgatatccagacagtaaaaattgcaggacttctgcatgatgttggc
catgggcccttcagtcacttgtttgaacgtgagtttcttccccaggttcggagtggttcc
cattggtcacatgaacatatgtcagcgaagatggttgaccacattgttaatcagcatcat
attgatatcgactctgagatggttaaaagagttaaggagatgatactggccagctcagaa
tttgcagtgcctaagagctcaagggagaagccttttttgtatgaaattgttgcaaatggc
cgtaatggaattgatgtggacaagtttgattatattcttcgtgactgccgcaattgtggg
ctgggattgaactttgagtatcaaagattaatggagacaatgcgggttctggatgatgaa
atatgctatcgtgccaaagattatcttaccgtccacaagttatttgctacccgtgctgat
ttgtatcgaacagtttatacacatccgaaagtaaaggccatagagcttatggtggttgat
gccctagtgaaagcaaatgattttcttgacattgcgtcacgcattgaggatccctctcaa
tactggaagttagatgacaccataattagaactattgagacagctccaaacgaagaacta
aaggaagctagggacttaatcctacgcattaggaggagaaatctttatcagttttgcaac
gagtattctgtacccaaggaaaaaatggagcatttcaaaaatgtcaccgctcaagatatt
gtttgttctcagaaaaatggaggagtgacattgaaagaggaggatgtcactgttagcaat
gtcaggattgatttgactcgtgggagacataatcctcttgaaagtatcagctttttccag
gattacaatagtcatgaaaaattcaccataagcgatgatcgtattagtcacttgctgccg
acatcatatcaagatatgatagtgcgtgtgtactccaaaaagcctgagctggtcggagca
atctctgaggcttttgagaactttcagctaaaaacatacgggatcaaggcacagatacat
gcaacaccagagaaaaagaagcgtcgtatcttagcatga

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