Malus sylvestris (European crab apple): 126587800
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Entry
126587800 CDS
T09027
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03420
Nucleotide excision repair
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126587800
09124 Replication and repair
03420 Nucleotide excision repair
126587800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126587800
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126587800
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126587800
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
126587800
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
126587800
TCR (transcription coupled repair) factors
Cul4-CSA complex
126587800
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126587800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
126587800
NCBI-ProteinID:
XP_050108833
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All DBs
Position
10:complement(36930716..36939163)
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AA seq
834 aa
AA seq
DB search
MSLMSHPNKRSSAINHSGTSSSSSSSSLNPSSAGPPMKKAKSQAVAGSLDPSKNGLHHHH
HHHPHTHPSQDPDNDAVFDPSSMSLDEDLKPDDPSPRGIAANLSRKKAQPPQPSTKKLVI
KLVKAKPTLPTNFEEETWAKLKSAISAIFLKKPDSCDLEKLYQAVNDLCLHKMGGSLYQR
IEKECERHIAAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTP
NVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIEKERLGEAVARTLLNHLLKMFTALG
IYSESFEKPFLECTSEFYAAEGMKYMQQADVPDYLKHVETRLHEEHERCLIYLDASTRKP
LVATAEKQLLDRHIPAILDKGFTLLMDGNRIEDLQRMHTLFSRVNALESLRQALSSYIRR
TGQGIIMDEEKDKEMVASLLEFKASLDTIWEESFFKNEVFCNTIKDAFEHLINLRQNRPA
ELIAKFLDEKLRAGNKGTSEEELEGMLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS
ASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFRQSSQARTKLPSGIEMSV
HVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKG
KKELAVSLFQTVVLMLFNDAEKLSLEDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKG
RDVDDGDTFTFNDTFIAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMK
TRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatgtctcaccccaacaaacgctcctcagcgatcaaccacagcggcacctcc
tcctcctcctcctcctcctctctcaacccttcttccgccggcccacccatgaaaaaggcc
aagtcgcaggcggtggccggttccctcgatcccagcaaaaatggcctccaccaccatcac
caccaccaccctcacactcacccgtcccaggaccccgataacgacgccgtattcgacccc
tcttccatgtccctcgacgaagatctcaagcccgacgacccctctccccgaggcatcgcc
gccaatttgtcccgcaaaaaggcgcagccccctcagccctctaccaagaagcttgtcatc
aagctcgtcaaagctaaacccacgttacccacaaattttgaagaggaaacatgggcaaag
ctgaaatcagctatttctgctatattcttaaagaaacctgattcttgtgacttggagaag
ctttatcaggctgttaatgatctctgcctgcacaagatgggaggaagtctttatcaacga
attgagaaggagtgtgaaaggcacatagctgcagcgctgcaatctttggttggccaaagc
ccagatttagtggtttttttatcacttgttgagagatgctggcaggacctttgtgaccag
atgttaatgattcgtggtatagctttatatcttgataggacatacgtgaaacaaactcca
aatgtgcgttcgttgtgggacatgggattgcagcttttccgcaaacacctttctctgtct
ccagaagttgagcacaaaactgtcaccggccttttaagaatgatcgagaaagaaagatta
ggtgaagcagtggctaggactctgcttaaccatcttttgaagatgtttacagctttagga
atctactcagaaagctttgagaagccatttcttgagtgtacttctgaattctatgctgct
gaaggcatgaaatatatgcagcaagcagatgttccggattacttgaagcatgtggagaca
aggttgcatgaagaacatgaaagatgtttaatctacctggatgcaagtacacgaaagcca
ttagttgcaacagcggaaaaacagcttttagatcgccatataccagctattctcgacaag
ggtttcacattgctgatggatgggaatcgcattgaggaccttcaaaggatgcacactctt
ttttccagagtcaatgcccttgaatcactaaggcaagcacttagctcatacatccggagg
acagggcagggcattatcatggatgaagagaaagataaagaaatggttgcttctcttttg
gaatttaaggcttctcttgacactatatgggaagaaagctttttcaagaatgaagtattc
tgcaacaccataaaggatgccttcgagcatttaattaatctccgacagaaccgacctgct
gagctgatagcaaagtttttggacgagaagcttcgtgctgggaataagggtacctctgaa
gaggaattggagggaatgcttgacaaagtcttggttttattcaggtttatacagggtaag
gacgtgtttgaagcattttataagaaagatcttgcaaaaaggctacttttgggaaagagt
gcttctattgacgcagagaagtctatgatttccaagctgaagactgagtgtggcagtcag
tttacaaacaaactcgaaggaatgtttaaggatattgaactctcaaaagagataaacgag
tccttcagacaatcatcccaggccaggacaaaactcccatcagggattgagatgagtgtt
catgtccttacaactgggtactggccaacgtatcctcccatggatgttagacttcctcat
gaattgaatgtataccaggatatcttcaaggagttttacctaagcaagtacagtggtagg
cgtttaatgtggcaaaattcattaggtcactgtgtcttgaaagcagattttcctaaaggc
aaaaaggagcttgcagtttctctgtttcagactgttgtcttgatgctgtttaatgacgct
gagaagctaagccttgaagacattaaggattcaactggcattgaggacaaggaactgaga
agaactctgcagtcccttgcatgtggaaaagttcgtgtcctacaaaagtttcccaaaggg
agagacgtggatgatggtgatacatttacgttcaatgacactttcattgctcctctgtac
cgcataaaggtgaatgcgatccaaatgaaggaaacagtggaggagaacacgagcaccact
gaaagagtattccaagaccgccaatatcaggttgatgctgctattgttcggataatgaaa
actaggaaggtgctgagtcacactcttctgataacagaactgttccaacagcttaaattt
ccgataaagccggcagatttgaagaaaaggattgaaagcctgattgaccgggagtaccta
gaacgggacaagaacaaccctcaaatttacaactacctagcataa
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