Malus sylvestris (European crab apple): 126589535
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Entry
126589535 CDS
T09027
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126589535
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126589535
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126589535
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126589535
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126589535
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126589535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
126589535
NCBI-ProteinID:
XP_050110810
LinkDB
All DBs
Position
11:complement(19733789..19755019)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTVVTPAPIDQPEDEEMLVPHSDLPENNHQPMEVVAQPETANNVENQPVEDPPSSRFTWR
VDNFTRMNTKKYYSDVFVVGGYKWRVLIFPKGNNVDHLSMYLDVADSSCLPYGWSRYAQF
SLGVINQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTLIVEAEVL
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSQ
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEHKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRSVHNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
IKRALEEQYGGEEELPQANPGFNNTPFKFTKYSNAYMLVYIRESDRDKIICNVDERDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDENLMEQIGKDIYFDLVDHDKVRSFRI
QKQTPFNLFKEEVAKEFGIPVHFQRFWLWAKRQNHTYRPNRPLTPMEETQSVGQLREVSN
KVHNAELKLFLEVELGLDLHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKSTGKA
AEILSKLNEMAGYAPEEEIDLYEEIKFEPNVMCEPIDKKFTFRACQLEDGDIVCFQKPTS
FEGEHLRYDDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKLHTYDDVVERVAQQLGL
DDPSKLRLTPHNCYSQQPKPQPIKYRGVDHLTDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIYK
VFPHSEKIENINDQYWTLRAEEVPEEEKNLGPNDRVIHVYHFTKDTAQNQMQIQNFGEPF
FLVIHEGETLAEIKARVQKKLQVADEEFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVY
GAWEQYLGLEHSDSAPKRSYAANQNRHTFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgtgacgcctgcccctattgatcaaccagaggacgaggagatgcttgtcccg
cattcggatttgcctgaaaacaatcaccaacccatggaagtcgttgcacaacctgaaact
gctaataatgtggagaaccagccagtggaggatcctccatcatcaagattcacatggaga
gttgacaactttactaggatgaatacaaagaagtattattcagatgtatttgttgttggc
ggctataaatggcgcgtgcttatttttccgaagggaaacaatgtggatcatttgtctatg
tatttggatgttgcagattcttcatgtttgccatatgggtggagtagatatgcacagttt
agcttgggggttatcaatcaaattcataacaagtattcagtacgaaaagacacacagcac
cagttcaatgcgcgagaaagtgattggggttttacatccttcatgcctcttagtgaactt
tacgatcccagtagagggtatcttgtgaatgatacacttatagttgaagccgaggttctt
gttcgtagggttgtagattactggacatatgactcaaaaaaggagacaggttatgtgggg
cttaagaaccaaggagcaacgtgctacatgaactctcttctccagactctgtatcatatt
ccttatttcagaaaggctgtttaccatatgcctacaactgagaatgatttgccatcgcaa
agcataccattggctctgcagagtctattttacaagctccagtacagtgacaatagtgtg
gcgaccaaagagcttacaaagtcttttggatgggacacatatgattcatttatgcagcat
gatgtgcaagaactcaatagagttttgtgtgaaaaacttgagcacaaaatgaagggaact
gttgtagagggaactatacagaagttattcgaaggacaccatatgaactacattgaatgc
atcaacgtggactacaaatctacaagaaaggaatcattttatgaccttcaacttgatgtc
aagggctgtcgtgatgtttatgcttcttttgataagtatgttgaagtggaacgtcttgag
ggtgataacaagtatcatgctgaacagtatggattacaggatgccaagaaaggtgttctg
ttcattgacttcccccctgtgcttcaacttcaactgaaacgatttgagtatgacttcatg
cgggacacaatggtgaagattaatgatcgttatgagttccctttacaacttgaccttgat
cgagagaatggaaaatatttatcgcctgaagctgataggagcgttcacaacctttacaca
cttcacagtgttttggtgcatagtggtggggtgcatggtggacactattatgcctttatc
aggccaacactttctgatcagtggtataaattcgatgatgagagggtaacaaaagaagat
ataaagagggcactagaggagcagtatggtggtgaggaagagttaccgcaggcaaaccct
gggtttaataacactcctttcaaatttactaaatattcaaatgcatacatgctggtgtac
attcgggaaagtgacagagataaaataatctgcaatgtggatgaaagggacattgctgaa
catcttagggagaggttaaaaaaagaacaagaagaaaaggagcacaagaagaaagaaaag
gcagaggcacacctgtatactattataaaggttgccagggatgagaacctcatggagcaa
attgggaaggatatttattttgatcttgtggatcatgacaaagttagaagttttcgtatt
cagaagcagaccccttttaacctttttaaggaggaggttgcaaaagagtttggcatacca
gtgcattttcagcgtttttggctgtgggcaaagcgtcaaaaccatacatatcgtcctaac
cgtccattgacgcctatggaggaaacacaatctgttggacagttgagggaggtatcgaac
aaggttcataatgcagaactaaagttattcttagaagtagagcttgggctggatttacac
cctattgcaccacctgacaagacaaaggatgatatccttctgttctttaagctttatgat
ccagaaaaagaagaattacgatacgttggaagacttttcgtgaagagtactggtaaggca
gctgaaatcttgtcaaaattaaatgaaatggctggctatgctcccgaggaagagattgac
ctatatgaggaaattaagtttgagcccaatgtcatgtgtgaacccatcgataagaagttc
acatttcgtgcctgccagcttgaggatggagacattgtctgctttcagaagccaacttca
tttgaaggtgaacatctccgctatgatgatgtcccatcttttctggaatatgtgcacaac
cgtcaagttgttcatttccgatcccttgagaaacccaaagaagaggatttctccctagaa
ctgtcaaaactccatacctatgatgatgttgtggaacgagtagctcaacaacttggtttg
gatgatccatccaaacttaggcttacaccgcacaactgttactcacaacaacccaaaccc
cagccaattaagtatcgtggggttgaccacttgactgatatgctggtccactacaatcag
acttcagatatattgtactatgaagtgttggacatccctctgcctgaattacaaggtttg
aaaactctgaaagtcgcattccatcatgctactaaggaagaagtggttattcacaccata
agactgccaaaacagagcactgttggggatgtaattaatgatcttaaaactaaggttgaa
ttgtctcatccggatgcagaacttaggttgcttgaagttttctatcacaagatctacaag
gtttttcctcacagtgaaaagattgagaacataaatgatcaatactggacattacgagct
gaagaggttcctgaggaagagaaaaatcttggtcctaatgatcgtgtaattcatgtttac
catttcactaaagacacagctcaaaaccaaatgcaaattcaaaactttggggaacctttt
ttcttggtcatacatgaaggtgaaactttggctgaaattaaagctcgagtacaaaagaaa
ttacaggttgcagatgaggagttcgctaagtggaagtttgcatttctttccctaggtcgc
ccagaatatcttcaggactcggacattgtgtctagtcggtttcagagaagagatgtctat
ggtgcttgggagcaatatcttgggctggagcactctgacagtgctcctaaaagatcttat
gcagctaatcagaatcgtcatacatttgaaaagccagtaaaaatttacaactag
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