Malus sylvestris (European crab apple): 126589878
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Entry
126589878 CDS
T09027
Name
(RefSeq) transcription initiation factor IIA large subunit-like
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126589878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126589878
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
126589878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
126589878
NCBI-ProteinID:
XP_050111276
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All DBs
Position
11:7761672..7767209
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AA seq
387 aa
AA seq
DB search
MAASTSSVYVSVIEDVINKVREEFMNNGPGEDVLKELQGIWEAKTMQAGVVNNPIERSAA
KGTPGSGVTPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIPATPIQTPLPGTGDNLYN
IPTGGSDYSANESGSSNGGVNAETKGGRPSPYMQPPSTWMNHRPPLDVNIAYVEGRDEVD
RGASHQPPTQDFLQMNSAKRKREDFPAQYQAGGFIPQQDGAGDAAPEKFEIEVSGGSTSI
ASRAWSEMLTRVRSSTPKIPQLDGPIPDPYDELSTPNIYNYQGTFNEDYNVASTPAPHDI
PVSTPAPVVQNDLGDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSKW
KCTLKDGIMHINNKDILFNKATGEFDF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccacgagcagtgtctacgttagtgttattgaggatgtcatcaacaaggtc
cgcgaggaattcatgaacaacggccccggggaagacgttctgaaggagcttcaaggaata
tgggaagcgaaaactatgcaggctggtgttgtaaataatcctatagagaggtcggcagca
aagggaacacctggcagtggtgttactccagttcacgatctcaatgtaccgtatgaaggg
accgaggagtacgaaactcccactgctgagatactcttccctccaacgccgttgcaaacc
ccaattcctgcaaccccaattcaaacgcctctacctggaactggggacaacttgtataac
atccctactggaggtagtgactattctgcaaacgagtccggtagcagtaatggtggtgtc
aatgcagagacgaaaggtggaagacctagcccctacatgcaacccccttctacttggatg
aaccaccgcccccctcttgatgttaatattgcttacgtggaagggcgggatgaggtagat
agaggggcctctcatcaacccccaacacaggactttctccagatgaattctgcaaagcga
aagcgtgaagattttcctgcacagtatcaagctggtggctttataccccagcaagatgga
gctggagatgctgcacctgagaagtttgagattgaggtcagtggagggagcacttctatt
gccagtcgtgcatggagtgagatgttaactcgtgtacgaagttcaactcccaagattcct
caacttgatggtccaattcctgatccttatgatgagctttctactcccaatatatacaat
tatcaaggaactttcaatgaagactacaatgttgccagcacacctgctccccatgatata
cctgtgagcactccagctccggttgttcaaaatgatttgggagatgatgacgacgatgag
cccccattgaatgaaaatgatgacgatgagttggatgatgtggaccaaggagatgagctt
aacacagcacatttggttttggcccagtttgacaaggtaacgcgcaccaagagcaagtgg
aagtgcacattgaaggacggcattatgcacataaacaacaaggatattctcttcaataag
gcaaccggagaatttgacttctga
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