Malus sylvestris (European crab apple): 126592848
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Entry
126592848 CDS
T09027
Name
(RefSeq) protein HASTY 1-like isoform X1
KO
K14289
exportin-5
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126592848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126592848
03036 Chromosome and associated proteins [BR:
msyl03036
]
126592848
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126592848
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
126592848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
126592848
NCBI-ProteinID:
XP_050114587
LinkDB
All DBs
Position
12:complement(30050642..30058569)
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AA seq
1202 aa
AA seq
DB search
MEESSNSVATNVAQAIAVALDWSSTPDARKAAVAFLESIKNGDVRILANTAFLLVKKDWS
SEIRLHAFKMLQHLVRLRWDELSSTERRNFANITVGLMSDIASPSEEWALKSQTAALVAE
MVRREGLNLWQELFPTLVSLSDKGPIHAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYTLLERHFGAALSEAGKQQFDLAKQHATTVTATLNAVNAYSEWAPLPD
LAKSGIIHGCGFLLSSPDFRLHACEFFKLVSQRKRPIDDTSAPEFDSAMSNIFQVLMNVS
KEFLYRSSPGAGVIDESDIEFAEYICESMVSLGSTNLQCIAGDSAVLPLYLQQMLGFFQH
FKLALHFQSLNFWLALMRDLMSKTKAVAHSAGDGSDPVDIERRKILSFLNDDMCSTILDV
SFQHMLKREKVIHGTAFSLGQLELWSDDVEDKGTFGQYRSKLLELIKLVALYKPLIAGSK
VSERIDTIIKTLLLSPMPAQDLVVMESMQSALENVVSTIFDGSNEIAGGHSEVQLELCRM
FEGLLQQLLSLKWTEPALVEVLGHYLDAMGSFLKYFPDAVGSVINKLFELLNSLPFVVKQ
DPSTSSARYARLQICTSFIRIAKTADTSVLPHMKAIADTMAYMKREGSLLRGEHNLLGEA
FLVMASAAGIQQQQEVLAWLLEPLSQQWTQIEWQNNYLSEPLGLVRLCSETPVMWSVFHT
ITFFEKALKRSGTRKSQSNLQSNSTESSMPFHPMASHLSWMLPPLPKLFRALHSLWSPTV
YQILPGEIKAAMTMSDVEQFSLLGEGNPKLPKGNIAFANGSHISASKEGYVEPNESDIRN
WLKGIRDSGYNVLGLATTVGDSFYKCLDSQSVALALVENIYSMEFRHIRLLVHSVLIPLV
KFCPVDLWEAWLEKLLLPLFQHSQQALSCSWSSLLHEGRAKVPDAHAILAGLDLKVEVIE
EKLLRDLTREICSLLSVTASPQLNAGLPSLEHSGHVHRVDISSLKDLDAYASSSMVGFLL
KHKGLALPALQICLEAFTWTDGEAMTKVSSFCSALIGLAVSTNSMELLQFVSKDLFSAII
QGLALESNAFISADLIGHCRDIYIHLCDRDPTPRQILLSLPFIKQHDLLAFEEALTKTSS
PKEQKQHMKSMLVLATGNKLKALAVQKSVNVITNVSTRPRSTANTTETRADDGETVGLAA
IL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcagcaacagcgtggctaccaacgtcgcccaagccattgccgtagctctc
gactggagctccactcccgacgcccgcaaagcagccgttgcattcctcgaatcgattaaa
aacggagatgtgcgaattttggcaaacactgcgtttcttctggtgaagaaggattggtct
tccgaaattcggttgcatgcgtttaaaatgttacagcatttggtgcgattgcggtgggac
gaactaagctctacagagcgtagaaactttgcaaatatcactgttggtttaatgtctgat
attgcaagtcctagtgaggagtgggcattaaaaagtcagacagcagcccttgttgccgag
atggttagaagggaaggactaaatctatggcaagaactgtttccaactctggtttcatta
tccgacaagggtcctattcatgctgagttagtctccatgatgctaaggtggcttcctgaa
gatattactgttcacaatgaagatttggaaggagatcggagaaggctattgctgcggggg
ctgacccaatctttacctgagattttgcctttattatacactttactagagaggcacttc
ggagctgcgttgagtgaagcaggtaaacaacaattcgaccttgcaaagcaacatgcaaca
acagtaacagctactttgaatgctgttaatgcatactctgaatgggctccattgcctgat
cttgctaaatctggtataattcatgggtgtggtttcttactttcttcacctgactttcgt
cttcatgcttgtgagtttttcaaacttgtttcccaaaggaagagacctattgatgatacc
tctgctcctgaatttgattctgcaatgagtaatatctttcaagtattgatgaatgtctct
aaagaatttttgtacagatctagccccggtgctggggttattgatgaaagcgatattgag
tttgcggaatatatatgtgaaagtatggtgtctttgggttccacaaacttgcaatgtatt
gctggtgatagcgccgtgctacctctttatttacaacagatgctggggtttttccaacat
tttaagctagctcttcattttcaatctctcaacttttggctggcactaatgagagacttg
atgtcaaagacaaaggctgttgctcactcagctggagatggttctgatccagtcgatatt
gaaaggagaaaaatcttaagttttttgaatgatgatatgtgtagtacaattctggatgta
tctttccaacacatgctcaagagagaaaaagtaattcacgggacagcattttctttaggg
caattggaattatggagtgatgatgttgaggacaaggggacttttggccagtatcgttca
aagttgttagaactgatcaagctggttgctttgtacaagcctcttatagctggttctaaa
gtttctgaaagaattgatacaatcatcaaaaccctcttgctttctccaatgcctgctcag
gacttagttgtgatggaaagcatgcagtcggctttagaaaatgttgtaagcactattttc
gatggatcaaatgaaattgctgggggtcattctgaagttcaacttgaactatgcagaatg
tttgaaggtttgcttcagcagcttctttctttgaagtggactgagccagcccttgtagaa
gtacttgggcactacttggatgcaatgggttcatttttgaagtattttccagatgcagtg
ggcagtgtcattaataaattatttgagctcctaaactcgcttccttttgttgttaagcag
gatccatccacaagtagtgcacggtatgcaaggttgcaaatttgtacatcgtttattcgt
atagccaaaactgctgacacaagtgttctgcctcacatgaaggctatagccgacaccatg
gcgtatatgaaaagagaaggttctttacttcgtggtgaacacaatcttctaggtgaagcg
tttcttgtcatggcttctgctgctggaattcagcagcaacaagaagttctggcctggtta
ctagaacctttaagccagcaatggacacaaattgagtggcaaaataattatctatctgaa
ccacttggtcttgttcgtttgtgctccgagaccccagttatgtggtcagttttccacact
atcacattctttgagaaggcacttaagagaagtggaaccagaaaatcccagtcaaatcta
caaagcaactcaacagaaagttctatgccctttcaccctatggcttctcatctatcatgg
atgctgccacctcttccaaaactatttcgtgccttacattccctttggtctccaactgta
taccaaatactacctggagagattaaagctgcaatgaccatgagtgatgttgagcaattc
agtcttcttggtgaaggaaaccctaaattgccaaagggtaatatagccttcgccaatgga
tcccatattagtgcaagtaaggaaggatatgtagagccaaatgaatcagacatacgaaat
tggttgaaaggtattagagacagtgggtacaatgtattgggcctggcaaccactgttggg
gactcattttacaaatgtttggatagtcaatctgttgccctagccctggtggagaatata
tattcaatggaattcaggcatatccggctgcttgttcattcagttttgattcctttggtt
aaattttgtcctgtggatttgtgggaggcatggttggaaaagcttttgctcccattattc
caacactcccaacaggctcttagttgctcctggtccagtcttctacatgaagggagagca
aaggtcccagatgcccatgccatacttgcggggttggacttaaaagtggaagtaatagaa
gaaaagctacttagggatctaactcgggagatttgttcactcctctctgttacagcttcg
ccacagctaaatgctgggcttccttccttggagcattctgggcatgttcatcgtgttgac
atatcttcgctcaaagatttggatgcatacgcatcaagctccatggtcggtttccttttg
aagcacaaaggtcttgcccttccagcgctgcagatatgtttagaagcttttacatggacg
gatggtgaagctatgacaaaagtttcttccttttgttccgctttgattggtttagcggtg
tcgacaaatagtatggagctcctgcaatttgtttctaaggatctcttttctgcaattatc
caaggtttagcccttgagtcaaatgctttcatcagtgctgatttgattggtcactgtcgt
gatatatatatacatctttgtgatagagatccaactcctaggcagattctgctctcgctc
ccttttatcaaacagcatgatttgcttgcttttgaagaagctttgacaaagacatctagt
cccaaagaacaaaagcaacatatgaaaagcatgctcgtattagctactggtaacaagtta
aaagcgcttgctgttcagaaaagcgtaaatgtcataacaaatgtatcaacgaggcctcgt
agcacagccaacaccactgaaaccagagcggacgatggagagactgttggactggcggcc
atattgtga
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