Malus sylvestris (European crab apple): 126592902
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Entry
126592902 CDS
T09027
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126592902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126592902
04147 Exosome [BR:
msyl04147
]
126592902
04090 CD molecules [BR:
msyl04090
]
126592902
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126592902
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126592902
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126592902
CD molecules [BR:
msyl04090
]
Proteins
126592902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_21
AAA_15
AAA_5
nSTAND1
APS_kinase
AAA_30
SbcC_Walker_B
DUF87
Rad17
DUF1360
Motif
Other DBs
NCBI-GeneID:
126592902
NCBI-ProteinID:
XP_050114663
LinkDB
All DBs
Position
12:16963388..16969656
Genome browser
AA seq
1354 aa
AA seq
DB search
MSQDSEGIKTIEQWRWSEMQGLELLPDAADPFKTNPPANPSNPTATTSTAQRATTSTPQR
ADRMESSEPKKDSTGGGGDGGEKSESLPAVQFKELFRFADGLDYVLMAIGSVGAVVHGSS
LPIFLRFFADLVNSFGANANDMDKMMQEVLKYALYFLVVGAAIWAASWAEISCWMWTGER
QSTKMRIKYLEAALSQDVQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFV
SGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTALGKISGKSQEALSQAGHTVEQTVAQI
RVVLSYVGESRALQAYSSALKVSQKLGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLV
RHHFTNGGLAISTMFAVMLGGIGLGQSVPSMSAFVKAKVAAAKIFKIIDHKPGMDRNSEA
GMELESVTGLVELKNVDFSYPSRQDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIE
RFYDPSSGQVLLDGHDIRTLKLKWLRQQIGLVSQEPALFATTIKENILLGRPDADQVEIE
EASRVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSAL
DSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGEN
GVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFST
SDFSLSLDASYPNYRLEKLPFKEQASSFWRLAKMNSPEWVYALLGSVGSVVCGSLSAFFA
YVLSAVLSVYYNPDHAFMIKQINKYCYLLIGLSSAALIFNTLQHFFWDIVGENLTKRVRE
KMLTAVLKNEMAWFDQEENESARVSARLALDANNVRSAIGDRISVIVQNTALMLVACTAG
FVLQWRLALVLIAVFPLVVAATVLQKLFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAF
NSEGKIVGLFTRNLQIPLRRCFWKGQIAGIGFGIAQFALYASYALGLWYASWLVKHGISD
FSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRKTEIEPDDPDATVVPD
RLRGEIELKHVDFTYPSRPDVPIFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDP
TSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEIIEAANL
ANAHKFISALPEGYKTFVGERGVQLSGGQKQRVAIARALLRKAEVMLLDEATSALDAESE
SSIQEALERACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYAR
MIQLQRFTHTQAIGIASGSSSSVKPREEEEREGK
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggggataaagacgattgagcagtggagatggtccgaaatgcaa
ggtcttgagctgctgcctgatgcggccgatccttttaaaaccaatccaccagcaaaccca
tcaaacccaacagcaacaacatcaactgcccaaagggcaacaacatcaactccccaaagg
gcagacagaatggagagctccgagcccaaaaaggactccaccggaggcggcggcgacggc
ggagaaaagtcggagtctttacctgcagttcagttcaaggaactcttcagattcgctgat
gggctggattacgttctgatggcaattgggtcagtcggagctgtcgtgcatggcagctct
ctccccatttttctccggttcttcgccgatcttgttaattctttcggcgcgaatgcgaac
gacatggataagatgatgcaggaggttttgaagtacgcattgtactttctggtggttgga
gctgcaatatgggcggcttcatgggccgagatttcttgttggatgtggaccggagagcgg
caatcaacaaagatgaggataaagtaccttgaggctgctctgagccaggacgttcagtac
tttgacactgaggttcgaacatccgacgtcgtttttgcaatcaacaccgatgcagtgatg
gtccaggacgccattagtgagaagttaggtaatttcattcactatatggcaacatttgtg
tctggattcgtggtgggttttactgctgtgtggcaattagcacttgtcacacttgctgtt
gttccgctgatagcggtgatcggagccattcataccaccgcattaggcaaaatctcaggc
aagagccaagaagctctgtcacaagcaggacacacggtagaacagactgtagctcaaatt
cgagttgttttgtcatacgttggggaatcgagagcgctacaagcatactcctcggcattg
aaggtgtctcagaagcttggttacaaaagtggatttgctaaaggaatgggactcggagcg
acttactttgtagttttctgctgttatgcacttcttctatggtatgggggttatcttgta
aggcaccacttcaccaatggcggtcttgccatctccaccatgtttgccgtcatgctaggt
ggaatagggttaggacagtctgtcccaagcatgagcgcattcgtgaaggctaaagttgca
gccgcaaagattttcaaaattattgatcacaaaccgggcatggaccggaatagcgaagca
ggaatggaattagagtccgttacgggactagttgagctgaaaaatgttgatttttcctac
ccttcgaggcaggatgttcgtatcctcaacaatttctcgctgaatgttccagctggaaag
accattgctttggttggtagcagtggctctggtaagagcactgtggtctctctcattgag
aggttttacgatccttcctcaggacaagtgctgctagatggacatgacataaggacattg
aaactaaagtggctgaggcaacaaatagggcttgtgagccaagaaccagctctgtttgct
accaccattaaagaaaatatacttttgggcaggccggatgcggaccaagttgagattgaa
gaagcctccagagttgccaatgcccattcattcattatcaaacttcctgatggttttgat
actcaggtaggggagagaggactgcaattgtctggaggacagaagcagagaatagccata
gctagggcaatgctgaaaaacccagcaatcctgctcttagacgaggcaacgagtgcattg
gactctgagtcggaaaagctggtgcaagaagcccttgaccggtttatgattggaaggaca
actctcgtcattgcccatcgcctttcaaccattcgcaaagctgaccttgtagctgttctc
caacaaggaagtgtttctgaaattggaacccatgatgaacttttctcgaagggagaaaat
ggtgtctatgccaagctcattcggatgcaagagatggcacatgaaactgctctcaacaat
gcgagaaagagtagcgcaaggccttctagtgccagaaactctgtgagctcacctataatt
gccagaaattcctcatacggtcgatcaccatactcacgccggctatcggacttttctact
tctgattttagtctctcccttgatgcctcatatcccaattaccggcttgaaaaactaccc
ttcaaggagcaagctagttccttctggcgccttgctaaaatgaactctcctgaatgggtt
tatgctttacttggttcagttggctctgttgtttgtggttctctaagtgctttctttgca
tatgttctaagtgctgtcctcagtgtttactataatccggaccatgccttcatgatcaaa
caaattaataagtactgctacttgttaattggactttcatcagctgcactaatcttcaac
acgttacaacatttcttttgggatattgtgggagaaaacctcacaaaacgggtgagggag
aaaatgctgacagcagttttgaaaaatgaaatggcatggtttgatcaggaggaaaatgag
agtgccagggtttcagcaaggctggctcttgatgccaacaatgtcagatcagctatcgga
gacaggatttctgtgattgtacagaacacagcactcatgcttgttgcttgcactgcggga
tttgttttgcaatggcgccttgcccttgtcctcatagccgtcttccctttggttgttgca
gccacagttttgcagaaactgttcatgacgggtttctctggagaccttgaagctgcacat
gccaaggccacccaactagctggggaggccatagccaatgtaaggactgttgctgcattc
aattcagagggaaaaattgttggtcttttcaccagaaacctccagattccactacgccgg
tgcttttggaagggccagattgctggaattggatttgggatagctcagtttgcactttat
gcttcctatgctctaggtctttggtatgcttcctggcttgtaaagcatggaatctccgac
ttctcaaagacaatccgagttttcatggtcctcatggtgtctgcaaatggtgcagcagaa
acattgaccctggcacctgactttatcaaaggtggtcgagccatgcgatcagtgtttgaa
ctccttgaccgcaaaactgaaattgaacctgatgatccagatgctactgtagtccctgat
cgtctgcgtggggaaattgaattgaagcatgtagactttacttaccctagtcgccctgat
gtccctattttccgtgacctctccctccgtgcccgagcaggcaagactcttgcccttgtt
ggtcctagtggatgcggtaagagttcagtcattgcactgatacagcgattctatgaccca
acatcaggacgagttatgattgatgggaaggatattcgaaaatacaatctgaagtcccta
cgaaggcacattgccgtggttccacaggagccatgcctctttgctacaaccatatacgaa
aatattgcttatggacatgagtcagcaactgaggctgagatcattgaagctgcaaatctg
gctaacgctcacaagttcatatctgcattgccggagggatacaaaacatttgttggggag
cggggagttcagttatctggaggacagaaacaaagagttgcaattgccagggctttattg
aggaaggcagaggttatgcttcttgatgaggcaacaagtgcacttgatgctgagtcggag
agctctattcaagaggcacttgagcgtgcttgctcgggaaaaaccacaattgtggttgca
cacaggctatcaactatcagaaatgcgcatgtcattgcagtgattgatgatggaaaggtg
gcagagcaaggatcccactcccatctattgaaaaattacccggatgggtgttatgcgcgc
atgatacagctacaaagattcacgcacacccaagccatcggaattgcatcaggttcaagt
tcatcagtaaaaccgcgagaagaggaagaaagagaaggaaagtaa
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