Malus sylvestris (European crab apple): 126593687
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Entry
126593687 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126593687
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126593687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126593687
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126593687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
WD40_like
Nup160
WDR54
CDtoxinA
PROPPIN
Rhamnogal_lyase
Utp13
Motif
Other DBs
NCBI-GeneID:
126593687
NCBI-ProteinID:
XP_050115749
LinkDB
All DBs
Position
12:complement(16229224..16237208)
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AA seq
956 aa
AA seq
DB search
MVKSYLRYEQAVAFGVIVSVDSNITYGSSGKHLLAPALEKVGVWHVRQGVCTRTLIPAAA
SRGHSLSVTSIASSHTSMVASGYADGSIRIWDSDKGTCETTLNGHKGAVTALRYNKLGSM
LASGGKDNDIILWDVVGETGLYRLRGHRDQVTDLLFLDSGKKLVSSSKDKFLRVWDLDTQ
HCMQTISGHHSEIWSIDSDAEERYLVTGSSDPELRFYTMKHEVIHEESISNIGENEIVND
GESSTKNKWEVLKLFGEVQRQSKDRVATVRFNKSGNLLACQVAGKTVDVFQVLDEAESKR
KAKRRLHRKKEKKSAKGATEVMENGDTNHGAGEEGNSPVVMVPDVFKLLQTIRASKKICS
ISFCPNTPKSLLATIALSLNNNSLEFYSIESKATTKTHTIELQGHRSDVRSVTLSSDNTL
LMSTSHNAVKIWNPSTGSCLRTIDSGYGMCGFIVPNSKYALVGTKGGTVEIIDIGSGTCI
EVVEAHGGTVGSIAAIPNENGFVTGSADHDVKFWEYQVKQKSPQDSKHLTVSNVRTMKMN
DDVLVVAVSPDAKYVLVALLDCTVKVYYMDTLKPFLSLYGHKLPVLCMDLSSDGDLLVTG
SADKNLKIWGLDFGDCHKSIFAHADSVMAVQFVRNTHYMFSVGKDRLVKYWDADKFELLL
TLEGHHADVWCLGISNRGDFIVTGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDLDN
AFENKYAPTEEIPEEGAVALAGKKSKETITATDSIIDALDIAEVELKRIAEHEEEKSKGK
VAELQPNVVLLGLSPSDYVLRALSNVQTNDLEQTLLALSFSDALKLLSFLKDWTSNPDKI
ELVCRVCTFLVQIHYNQLLSTLAARLVLSELEEIYPRVKECKDTIGYNIAAMEHIKQLRA
SKSGGLFQDAKSKLQEIRAQHSKSLEARTNTREENGRKRRRKSKNPSDVHVRLFDK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcgtacctgcggtatgagcaggcggtggctttcggtgtcattgtctccgtc
gattccaacatcacatacggcagctccgggaagcaccttcttgctccggccttggagaag
gtaggtgtgtggcatgtacggcaaggcgtttgtaccagaacactaatccctgctgctgca
tcgcggggacactctctatctgtcacctccatcgcatcctcgcatacttctatggtagct
agtgggtatgctgatggtagtataagaatttgggattccgacaaaggaacctgcgagacc
acattgaatggacataaaggagctgtcaccgctttacgctacaacaagcttggatctatg
cttgcatctggaggaaaagataatgacattatattatgggatgtggttggtgagaccggc
ctatatcgcctccgtggccatcgagatcaggtgactgacctccttttcctggattctggt
aaaaaactcgtcagttcctcaaaagataaatttttgagggtgtgggatcttgatacccag
cattgcatgcagacaattagtggccaccatagcgaaatttggtccatagacagtgatgca
gaagaaagatatttggtcactgggtcttcggatccagaacttaggttttacacaatgaag
catgaagtgatacatgaggaatccatttctaatataggcgaaaatgaaattgtgaatgat
ggagagtcatcgaccaaaaataaatgggaagttttgaaactgtttggtgaagttcagcga
caaagcaaggatagagttgcaactgtgagattcaacaagtctggtaatttgttggcttgt
caagtggcaggtaagacagtagatgtattccaggtactagatgaggctgaatcaaagcgt
aaggcaaaacgtaggcttcaccggaagaaagaaaaaaaatctgcaaaaggggcaactgag
gtgatggaaaatggcgacacaaatcacggagctggagaagaaggaaatagtcctgtggtt
atggttcctgatgtcttcaagcttcttcaaactattcgagctagcaaaaagatatgctcc
atctctttctgtcctaacactccaaagagtttgctagctacaatagctttgtctttgaac
aataattcattggaattttattcgattgaaagcaaagcaacaacaaaaacacatactata
gagctccaagggcaccggtctgatgtcagaagtgttacacttagctcagacaacacactc
ttgatgtcaactagtcacaatgcggtaaagatttggaatccaagcactggttcctgcctt
cgaactattgattctggatatggcatgtgtggttttatcgttcctaatagcaagtatgca
cttgtcggaactaaaggcggaacagtggaaattattgacattggaagtggcacttgcatt
gaagtagtggaagctcatggtggcactgttggctccattgcagccattcccaatgaaaat
ggttttgtcacaggaagtgcagatcacgatgtgaagttttgggaataccaagttaaacaa
aagtctccccaagactctaagcacctaacggtgtcaaatgtaaggactatgaagatgaat
gatgatgtccttgtggttgctgtcagccctgatgcaaaatatgttttggttgctctgttg
gactgcacagtgaaggtttactatatggatacgttgaaacctttcctttccttatatggt
cacaagctgcctgttctatgcatggatttatcatctgatggcgatctattagtgactgga
tctgctgacaaaaatttgaagatttggggtttagattttggtgattgtcataaatccata
ttcgctcatgctgacagtgtcatggcggtgcaatttgtacgaaatacacattacatgttt
agtgtcgggaaagatcgcctagtcaaatactgggacgctgataaatttgagttgctttta
actcttgagggacaccatgcggatgtttggtgccttggaattagtaaccgtggtgatttc
attgttacgggatctcatgaccgatcaatacgtcgttgggatcgtactgaagagcccttt
tttatcgaggaagagaaagagaaaaggttggaagagatgttcgagtctgacctcgataat
gcatttgagaacaagtatgcacccacggaagaaattcctgaagagggagctgtggcctta
gcagggaagaaatcaaaagaaacaattacagctactgattcaattattgacgcactagat
atagcagaggtagaattgaagcgaatcgccgaacatgaggaggagaaaagcaaggggaaa
gttgctgagttacaaccaaatgttgttttgcttgggctctctccatctgattatgttctt
cgtgccctttcaaatgttcagacaaatgatctggaacagacgctactggctctatcattc
tcagacgctttgaagctcttgtctttcttgaaggactggacttcgaatcctgataagatt
gaacttgtttgcagggtttgtacattcctggtgcagatacattataatcagttacttagt
acgctggcagccagacttgtgttgtcagagttggaagagatttatccaagagttaaggaa
tgcaaagatactattggttacaacattgcagcaatggagcatattaagcaactgagggct
tcgaaatcaggtggattgtttcaagatgcaaaatcaaagttacaggaaattcgtgcgcag
cattctaagagtctagaagcaaggacaaatacgagagaagaaaatggaagaaagaggagg
agaaagagcaagaatccaagtgacgtacatgttagattgttcgacaaatga
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