Malus sylvestris (European crab apple): 126597054
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Entry
126597054 CDS
T09027
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126597054
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
126597054
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
DUF2117
Motif
Other DBs
NCBI-GeneID:
126597054
NCBI-ProteinID:
XP_050119772
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Position
13:complement(20099036..20100279)
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AA seq
399 aa
AA seq
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MARKLNILAAFLFLLSASKTQAEPGVFDVTSATYGAKPGSDITHALAKAWIDACASPAPS
KVVVPSGTYMLTEASFKGPCKAPIEIQVQGKLTAPADGGKLTRPDTWVGFDHVNKLTVSG
GGTFDGQGALAWKKNDCNKNKDCKSIAINMRFNFVTNSTIQDITSLDSKNFHINVLGCHN
VTFQRVNVTAPGESINTDGIHIGRSTGINITDAHIGTGDDCVSIGDGNKEITITRVTCGP
GHGISVGSLGRYPNEEPVVGIRVKNCTLTNTSNGVRIKTWPASPSDGIASDMHFEDIIMV
NVSNPVLIDQQYCPWNQCKQNVPSKVKISNVSFKNIKGSSATPLAVQIVCSGGIPCENVE
LADIDLTYNGNKGPLTSQCSNVKPTITRVPNALACATSS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaaattgaatatcctggcagcgttcttgttcttattgtcagcatctaaaact
caagctgagccaggtgtgttcgatgtcacgagtgcgacatatggtgcaaagcccggctct
gatatcacgcacgctttagcaaaggcttggattgatgcgtgtgcatcaccggcaccgagt
aaggttgttgttccaagtgggacgtacatgttaacagaagcaagtttcaaaggtccttgc
aaggctcctattgagattcaagtacaagggaaattaacagctccagcagacggcggcaaa
cttaccagaccggatacttgggttggttttgaccacgtcaacaagcttaccgtatcaggt
ggtggaacttttgacggccaaggagcacttgcttggaagaaaaatgactgcaacaaaaac
aaagattgcaaatctattgccatcaatatgaggttcaacttcgttaccaattccacaatt
caggacataacttccctcgacagcaagaatttccacatcaacgttttggggtgccacaat
gtcacattccaacgtgtcaatgtcacggcaccgggggagagcataaatacagatggaatc
catatcgggcgttcaactggaatcaacattactgatgcacacattggaactggggatgac
tgtgtttccattggcgatggaaacaaagaaatcaccataactagggtgacttgtggacca
ggccatggcataagcgttggaagtcttggaaggtatccgaatgaagaacctgtggttgga
atcagagttaagaactgcaccttgactaatacatccaacggtgtgagaatcaagacatgg
cctgcttctccttcggatggtattgcatcagatatgcattttgaagatattatcatggtc
aatgtcagcaatcctgtcctcatagaccaacagtactgcccgtggaaccagtgtaaacag
aacgttccatcaaaagttaagatcagcaatgtcagctttaaaaacattaagggctcatct
gcaactccccttgcagtccagattgtatgcagcggtggcataccgtgtgagaatgtggaa
ttggctgacatcgatctcacctacaacggaaataaaggccctcttacctctcaatgttct
aacgtgaagcccaccattactcgcgtgcccaatgctcttgcgtgtgctacctcttcttga
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