Malus sylvestris (European crab apple): 126604942
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Entry
126604942 CDS
T09027
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126604942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126604942
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
126604942
Prokaryotic type
Archaeal type
TFB
126604942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
TF_Zn_Ribbon
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
126604942
NCBI-ProteinID:
XP_050128229
LinkDB
All DBs
Position
15:complement(22295652..22298309)
Genome browser
AA seq
509 aa
AA seq
DB search
MRCPYCSTGQARCATTTNSRRSITECTSCGRVVEERQSQFHHLFHLRAQDNPLCLVTSDL
PTLPHTQQPNDADDEDPFLPTGFITAFSTWALEPNPLFLRSSLSFSGHLAELERTLESTS
SSSASSSSSTVVVDNLRAYMQIIDVASILGLENDISDHAFQLFRDCCSTTCLRNRSVEAL
ATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPR
FCTLLQLNKSAQKLATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKV
TGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSSSKVDFVDLPLY
LEREKLLERKPNKPNEGLDMNIPPLVCKEEYERKGNSQGPMNQSTTFWQSQVPYGTSDLK
TAGQKYENGVEGMDTDEPQPNQQPNPTHTINPPSSGACPVTRQFRCPSTSSPSPNVMYVL
PPKLAPGYTELRSSGGQNGSESGRHSGEA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccctactgctccactggccaggcacggtgcgcgacgacaaccaactcccgt
cgttcgataacggagtgcacgtcgtgcggccgtgtggtggaagagcgccaatcccaattc
caccacctcttccacctccgtgcccaagacaaccctctctgcctcgtcacctccgacctc
cccaccctcccccacacccagcaacccaacgacgccgacgacgaagaccccttcttgccc
accggcttcatcaccgccttctccacctgggccctggagcccaaccctctcttcctccgc
tcctccctctccttctccggccacctcgccgagctggaacgcaccctcgaatccacctcc
tcctcctccgcatcctcgtcgtcgtccaccgtggtggtcgataatctgagggcctacatg
caaatcatcgatgtcgcttcgattctggggttggaaaacgacatctcggaccacgcgttt
cagctcttcagggactgctgctccaccacttgcttgcggaatcgcagcgttgaagctctc
gcgactgctgctttggtccaggctatcagagaggcccaagagcctagaaccctccaggaa
atctccattgctgcaaatgtgccccagaaagaaattggcaagtacattaagatacttgga
gaagcactgcagcttagtcagcccatcaacagcaattcgatatcggtgcatatgccgcgg
ttttgcactctcctccagctcaataaatctgctcagaaactggcgactcacattggagag
gttgtcatcaacaagtgcttctgcacgcgtaggaaccccattagtatctccgcagctgca
atatatttagcctgccagcttgaagacaagagaaaaactcaggcagagatttgtaaggtg
actggtcttactgaagttactctccgaaaagtgtacaaggagctcttggagaactgggac
gacttgctcccatctaattacactcctgcagttcctccagaaagagcattccctaccact
gtaatcgcttcaggccgttcttcatcatctaaagttgattttgttgatttaccactttat
ttggagagggaaaagctgcttgaaagaaaaccaaacaagccaaacgagggattagacatg
aacattccaccactcgtatgtaaagaagagtatgagcgtaaaggtaattctcaaggtccg
atgaatcaatcaactactttctggcaatcccaggttccatatgggacttctgatctaaag
acggcaggacaaaagtatgaaaatggtgtggaaggaatggacacggacgagccccaacct
aaccaacagcctaatccaactcatactataaaccccccaagttcaggtgcatgtccagtt
accaggcagtttcggtgcccatctacatcaagtccttctccaaatgtgatgtatgtgctg
ccgccgaagctggcacctggttataccgagcttagaagcagcggtggacaaaatggaagt
gaaagtggcagacacagtggggaggcctag
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