Malus sylvestris (European crab apple): 126605945
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Entry
126605945 CDS
T09027
Name
(RefSeq) peroxisome biogenesis factor 10-like isoform X1
KO
K13346
peroxin-10
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126605945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126605945
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
126605945
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GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_10
U-box
Motif
Other DBs
NCBI-GeneID:
126605945
NCBI-ProteinID:
XP_050129359
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Position
15:3544129..3547494
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AA seq
396 aa
AA seq
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MGWNEATGSGQQAGPSGGEPGPSSSSDPGVARQFPLAAQPEIMRAAEKDDQYASFVYDAC
RDAVRHLLGTRVAVAYQNETKLLGQVLYYVLTTGSGQQTLGEEYCDITQVAGPYGLPPMP
ARRVLFIVYQTALPYIAERISSRAANRGIALADSEELYGISASLSNDAQSSSTIHNSAGS
TSGPSVSALRRLKEKFNGLWISLARRWPTVLPIAREFLQLVIRANLMFFYFEGLFYHISK
RAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSAQQTFGTHQT
SAGRDLPVLNEEGNLISADATRGSWVSESSTSESQASGSSKCTLCLSNRHYPTATPCGHV
FCWSCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggttggaacgaggcaaccggatcggggcagcaagccggcccgagcggaggagaaccg
ggtcccagcagcagcagcgacccgggcgtggcacggcagttcccacttgcggctcagccg
gagatcatgagagcagccgaaaaggacgaccagtacgcctccttcgtctacgacgcttgc
cgagacgccgtccgccacctcttgggtacgagagttgctgtagcttaccagaacgagaca
aagcttcttgggcaagtgctttattacgttttgacaacagggtccggccagcaaactctc
ggggaagagtactgcgacatcactcaggttgccggaccttatggactgcctccaatgcca
gcaaggcgtgtgcttttcattgtctaccagacagcccttccttacattgccgaacgaatt
agctctagagctgctaaccgtggcatagccctagctgattccgaagagctctatggcatc
agtgcttcactaagcaatgatgctcaatcttcttccactattcataattcagctggctct
acatctggtccatctgtttcagctttgagaagattaaaagagaagttcaacgggttatgg
atttcgttagctcggagatggcctacggtgcttcctatagctcgagaatttttgcaattg
gttattcgtgctaacctcatgttcttttactttgaaggcctcttctatcatatatcaaaa
cgagcagcaggcattcgttatgtgttcatcggaaaaccatctaaccaaaggcctcgatat
caaattttaggcgtatttctattgattcagctttgtatcatagctgctgaaggactgagg
cgcagcaatttatcctctattgcaagttcagctcagcagacttttggtacgcaccaaact
tctgcaggtcgagatttgcctgtgttaaatgaggaaggtaatttgatatctgcggacgct
accaggggaagttgggtctctgaatcttcgacttcagagtctcaggccagcgggagcagc
aaatgcacactctgtttgagtaatcgccactacccaacagccacaccttgcggtcacgta
ttttgctggagctgcatcatggaatggtgcaacgaaaagcccgaatgccccctctgccgg
actcccataacccattcgagcctagtttgcttgtaccattcagacttctag
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