Malus sylvestris (European crab apple): 126607548
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Entry
126607548 CDS
T09027
Name
(RefSeq) ABC transporter B family member 11-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126607548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126607548
04147 Exosome [BR:
msyl04147
]
126607548
04090 CD molecules [BR:
msyl04090
]
126607548
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126607548
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126607548
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126607548
CD molecules [BR:
msyl04090
]
Proteins
126607548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_15
AAA_5
AAA_30
AAA
AAA_7
DUF815
nSTAND1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
126607548
NCBI-ProteinID:
XP_050131131
LinkDB
All DBs
Position
16:complement(10062486..10093155)
Genome browser
AA seq
1294 aa
AA seq
DB search
MAEENPVNGDVIKEEATTASNGNSAVVDSENNAQDTSKSKEDGTKTVPFHKLFSFADSLD
YLLMSVGTISAIGNGICLPLMTIILGDLINSFGGAGNTKGVVDAVSEVALKFVYLAVAAA
ALSFLQMSCWMVTGERQASRIRSLYLKTIIRQDVGFFDKETNTGEIVGRMSGDTVLIQEA
MGEKVGSFIQLIATFIGGFVIAFVKGWLLTLVMLSSLPLLVLSGAVIGIIISKLASQGQT
AYSQAAIVVEQTIGSIRTVASFTGEKQAIANYDNSLIKAYNSGVQEGLASGFGIGAGMLV
MMCSYALAIWFGGKMILERGYTGGEVINVIFAVLTGSMSLGQASPSMNAFAAGQAAAYKM
FETINRKPEIDAYDTNGKQLHDIRGDIELRDVHFSYPTRPDEQVFHGFSLSIPSGVTAAL
VGESGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTSSIK
DNIAYGKDGATDEEILAASELANAAKFIDKLPQGLDTMVGEHGAQLSGGQKQRVAIARAI
LKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVIVAHRLSTVRDADTIAVIRRGT
IVEKGPHSELIKDSDGAYSQLIRLQEMSSVSEQTSVNDHERPEIISMDYRKHSRQRLSNL
RSISKGSSGRGSSSHHSFSVSYDVPTVVGVPEAAHAGPDIPESASSSAPPEVSLRRLAYL
NKPEIPVLLLGTIAAVANGSILPIFGVLISSVIKSFFEPPRELRKDSEFWAVIFIVLGVA
SFMVLPARQYLFAVAGCKLIKRVRSMCFKKVVYMEVSWFDDPEHSSGAIGARLSADAASL
RGLVGDALALVVENLAMAIAGLVIAFVANWQLALIILVLLPLLGVTGYVQVKFMTGFSAD
AKKMYEEASQVATDAVGSIRTIASFCAEEKVMELYQRKCEGPIKTGIRRGLISGIGFGLS
FFFLFSVYACSFYAGARLVAAGKTTFSDVFRVFFALTIAAVGVSQSGSLAPDVSKVKSSA
ASIFAILDRKSKIDSSDDSGKTIENVKGEIEFRHVSFKYPTRPDVQIFEDLCLTIHHGKT
VALVGESGSGKSTVVSLLQRFYDPDSGYITLDGMEIQKLQLKWLRRQMGLVSQEPVLFND
TIRANIAYGKEGDATEAEIIAAAELANAHKFISSLQQGYDTTVGERGVQLSGGQKQRVAI
ARAIMKAPKILLLDEATSALDAESERVVQDALDRVMVDRTTVVIAHRLSTIRSADLIAVV
KNGVIAEKGKHETLLNVEDGIYASLVALHASTSS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaaaatcctgttaatggagatgtaatcaaggaggaggctacgacagcatca
aacggaaactcagcagtggtggattctgaaaacaacgcacaagatacaagcaagagcaag
gaggatggcaccaaaacggttccatttcacaagcttttctcctttgctgattccttggat
tacctgttaatgtctgttggtacaatcagtgccattggaaatgggatctgtttgcctctc
atgaccataatccttggagatttaattaattcttttggaggagcggggaataccaaaggc
gtggttgatgcagtttccgaggtggctctaaagttcgtttatttggctgtggcagctgct
gctctttcatttctacaaatgtcttgctggatggtcactggagagagacaagcttcacga
ataagaagtttatacttgaaaacaattataaggcaagatgttggcttttttgataaagaa
acgaacactggggaaattgttgggaggatgtcaggtgataccgtgctcattcaagaggca
atgggcgaaaaggtaggaagttttatccaattaattgcaacattcatcggaggctttgtt
atagcatttgttaagggatggcttctcacgcttgtcatgctatcatctcttcctcttctc
gtcctctctggtgccgtcattggcataattatatcaaagttggcatcccagggacaaact
gcttattcacaggcagcaattgtagtagagcagacaattggttcaataagaactgttgca
tcctttacaggagaaaaacaagctatagctaattacgacaattccttaattaaggcatac
aattctggtgtacaagagggcttggcatctggatttggaattggagcgggaatgcttgtt
atgatgtgtagttatgctttggctatatggtttggcggaaagatgattcttgaaagagga
tatacaggaggagaagtaataaatgtaattttcgctgtgctgactggttccatgtctctt
gggcaagcatctccatccatgaatgcatttgctgctggacaagctgcagcttataagatg
tttgagacgattaacagaaagccggagatagatgcttatgatactaatgggaagcagttg
catgatatacgtggagacatagaactgagggatgttcattttagttatcctacgagaccg
gatgaacaagtattccatggattttcactctcaatacctagtggtgtaactgctgctttg
gttggagagagcggaagtggtaaatcaactgtaatcagtttgattgagagattttatgat
ccccaagctggtgaagttcttattgatggtattaatctgaaagagttccagctgaaatgg
atcagacagaaaataggccttgtcagccaggaacccgttttgtttacctctagcattaaa
gataacattgcctacgggaaggatggtgccactgatgaagaaatactggctgcttctgag
ctcgctaatgctgctaaattcatagacaaactgcctcagggactagacacaatggttggt
gaacatggagctcagctgtctgggggccaaaagcagagagttgccatagctagagcaatt
ctgaaagacccaagaattctactattagatgaagccacaagtgctcttgatgcagaatct
gagagagttgtgcaggaggcactggacagaattatggtaaaccgaaccacagtcattgta
gcccaccgtttgagcacagtaagggatgctgacaccattgctgttatacgcaggggaaca
attgtcgaaaaaggtccacattctgagctaatcaaggactctgatggagcatatagccag
cttataaggttgcaagaaatgagcagtgtgtcagaacaaacatctgtgaatgatcatgaa
aggccagaaattataagtatggattatcggaaacattcaagacaaagactttcaaactta
cgatccataagcaagggatcatctggaagaggaagtagcagtcatcattccttctcagtc
tcatatgatgtgcccactgtagtaggtgtccctgaagcagcacatgcaggacctgatatt
cctgagtcagcgtcatcaagtgcgcctccagaagtttcacttcgccgcctggcgtacttg
aacaagccagagatccctgttttattactaggtaccatagccgcagtagcgaatgggtca
atcttacctatttttggggtactgatatccagtgtaatcaagtccttctttgagccacct
cgtgaactccgaaaggactctgagttttgggccgtaatcttcattgttctgggagtggca
tccttcatggtacttcccgcaagacagtacctttttgctgtggctggttgtaaattaata
aaacgagtccgatctatgtgctttaagaaggtggtttacatggaagtaagttggtttgac
gatcccgagcactcgagtggtgcaattggtgcaaggctttctgcagatgcagcttctctg
cgagggctggttggagatgctctagctttggttgttgagaatctagcaatggcaattgct
ggtttggtgattgcttttgtcgcaaattggcaactcgctcttataatcctcgttctgctt
ccgctgttaggagtaactggttacgttcaagtcaagttcatgacaggattcagtgcagat
gcaaagaaaatgtacgaggaggcaagtcaagtagcgactgatgctgtagggagtattaga
acaattgcttccttctgtgctgaagagaaggtgatggagttataccagagaaaatgtgaa
ggccctattaagacagggataagacgagggttaatcagtgggataggatttgggttatca
ttcttttttcttttttctgtgtacgcctgtagtttttatgctggtgcccgacttgttgca
gcaggcaagacgacattctctgatgttttccgggttttctttgctctcactatagcagct
gttggagtgtctcagtctggatccctagcccctgatgtaagtaaagtaaaaagctctgct
gcttccatatttgcaattctcgaccggaaatcaaagatagactccagtgacgactcagga
aaaactatagaaaatgttaagggagaaattgaatttcgacatgtgagcttcaagtatcca
accagacctgacgttcaaatttttgaggatctttgcttgaccatccatcatggcaagaca
gttgctctggttggagaaagcggaagtgggaaatcaacagttgtctccttgttgcagaga
ttttatgatcctgattcgggttacattacactggatggaatggaaatccaaaagctacag
ttaaagtggttaagacggcaaatggggctggtgagccaggagcctgtattgtttaatgac
acaatccgagccaacattgcatatggaaaggaaggggatgcaacggaagctgaaattata
gctgcagcagaattggcaaacgctcacaaattcatcagtagtttacaacagggttatgat
acaactgtaggagagcggggtgttcagttgtccggcggacagaagcaaagggtggcaatt
gcaagagccataatgaaggcccctaagattttactactagatgaagccacaagtgcgctt
gatgctgaatccgaacgagttgttcaagatgcattggatcgtgtcatggtggatcgaacc
acggtggtgattgctcatcggttatccacgatcaggagtgcagatttaatagccgtggtg
aaaaatggagtgattgcagagaaaggaaagcatgaaactttgctcaatgtcgaggatggc
atttatgcttctttggtagcactccatgcaagtacctcatcgtag
DBGET
integrated database retrieval system
