Malus sylvestris (European crab apple): 126607549
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Entry
126607549 CDS
T09027
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126607549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126607549
04147 Exosome [BR:
msyl04147
]
126607549
04090 CD molecules [BR:
msyl04090
]
126607549
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126607549
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126607549
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126607549
CD molecules [BR:
msyl04090
]
Proteins
126607549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
AAA_21
AAA_15
Zeta_toxin
RsgA_GTPase
DUF815
AAA_5
AAA_30
AAA_25
DUF87
nSTAND1
AAA_7
ECH_2
DUF2852
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
126607549
NCBI-ProteinID:
XP_050131141
LinkDB
All DBs
Position
16:complement(10044431..10049956)
Genome browser
AA seq
1269 aa
AA seq
DB search
MAEDEDVIKKQVTATSKGHSAVEDSQNSKKDTSKNKEDGTKTVPFHKLFSFADTLDYMLM
SVGTISAIGNGLCTPLMTIILGEVINSFGGTGNTKEVVDAVSKVAVKYVYLALGAGVAAF
LQVSCWMITGERQAARIRSLYLKTILRQDVSFFDTETNTGEIVGRMSGDTVLIQDAMGEK
VGTVIQLIATFMGGFVIAFIKGWLLALVMLSSIPLLVLAGAVVSILTSKLVTRGQAAYSV
AATVVEQTISSIRTVASFSGEKQAIDNYNSSLTEAYNSSVQEGLASGFGFGFVMLIMMSS
YALAIWFGGKMILERGYTGGEVINVLFAVLTGSMALGHTSPCVSAFAAGQAAAYKMFETI
NRKPEIDSYETNGQQCQDIHGDIELRDVYFSYPARPEEKIFRGFSLSIPRGATAALVGES
GSGKSTVISLIERFYDPQSGEVVIDGINVKDYQLKWIRQKIGLVSQEPILFTCSIRDNIA
YGKDGATTEEIRAAAELANAAKFIDKLPQGLGTMVGEHGTQLSGGQKQRVAIARAILKDP
RILLLDEATSALDAESERVVQEALDRIMINRTTVIVAHRLSTVRNADTIAVIQRGTIVEK
GPHSELVKDPGGAYSQLIRLQEMSSASEQTDVNDQERRSSVELDSQNSSHHSLSISYDVA
PALGFLEVAPKESDIPASESSVVPPEVSLRRLAYLNKPEIPVLIFATIAAIANGLIFPFF
GLLIASVVKTFFEPPHLLLNNSKFWALIAIVLGVGSCVTLPSRQYLFAVVGSRLIKRVRS
MCFEKVVHMEVSWFDDPEHSSGAIGARLSTDIAYLRGLVGDAFGLHVQNSSTAIAGLVIA
FVANWPLALITLVLLPLLAVNGYFQVKFMKGFSADAKKMYEEASQVANDAVGSIRTIASF
CAEEKVMQIYQRKCEGPIKTGIRRGLISGIGFGLSFFLQFSVFACIFYAGSQLVAAGKTT
FSDVFRVFFALTMATVGVSQSGSLAPDLSKGKSSLASIFAILDRKSKIDSSDNFGTTIEN
VKGEIELRHVSFKYPTRPDVPIFQDLCLTIHHGKTVALVGESGSGKSTVVSLLQRFYDPD
SGHITLDGIEIQKLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGDATEAEIIAAAEL
ANAHKFISSLQQGYATVVGERGIQLSGGQKQRVAIARAIIKAPKILLLDEATSALDAESE
RVVQDALDRVMVDRTTVVVAHRLSTIKTADLIAVVKNGVIAEKGKHEKLLNVHDGIYASL
VAVHASASS
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatgaagatgtaatcaagaagcaggtcacggcaacatccaaaggccactca
gcggtggaggattcccaaaacagcaagaaagatacgagcaagaacaaggaggatggcacc
aaaacagtaccatttcacaagcttttctcctttgcagataccttggattacatgttaatg
tctgttggtacaatcagtgccattggaaatgggctctgtacgcctctaatgaccataatc
ttgggagaggtgattaattcttttggaggaactgggaataccaaagaagtggtggatgca
gtctccaaggtggctgtaaagtatgtttacttggctctaggtgctggtgttgctgctttt
ctgcaggtatcttgctggatgattacgggtgaaagacaagctgcacgaataaggagttta
tacttgaaaacgatattgaggcaagatgtcagcttcttcgatacagaaacgaacactggg
gaaattgttgggaggatgtcgggtgatactgtgctcattcaagacgccatgggcgagaag
gtaggaactgttattcagttaattgcaacatttatgggaggctttgttatagcatttatt
aagggatggcttctcgcccttgtcatgctatcttctattccccttcttgtcctcgctggt
gcggtcgtgagcatccttacatcgaagttggtaacccgtggacaagctgcttattcagtg
gcagcaactgtggtggagcagacaattagttcaattagaactgttgcatcattttcagga
gaaaaacaagctatagacaattacaactcctccttaactgaagcttacaattcttctgtg
caagaaggtttggcatcgggttttggatttggcttcgttatgcttattatgatgtctagt
tatgctttggctatatggtttggcggaaagatgattcttgaaagaggatatacaggagga
gaagtaataaatgtacttttcgctgtattgactggctccatggctcttgggcacacatcc
ccatgcgtgagtgcatttgctgctggacaagctgcagcttataagatgtttgagacaatt
aacagaaagccggagatagattcttatgaaactaatggacagcagtgccaagacatccat
ggagacatagaactgagggatgtttattttagctatcctgcaagaccggaggaaaaaata
ttccgtggattttctctctcaatacctagaggtgcaactgctgctttggttggagagagc
ggaagtggcaaatcaactgtaatcagtttgattgagagattttatgatccccaatctggg
gaagttgttattgatggtattaatgtcaaagattaccagctcaaatggatccgacagaaa
ataggtcttgtcagccaggaacccattttgtttacttgtagcataagagataacattgcc
tatgggaaggatggtgcaactacagaagaaataagggccgctgcagagcttgccaatgct
gctaaattcatagacaaattgcctcagggactaggcacgatggttggtgagcatgggact
cagctatccgggggccaaaagcagagagtagccatagctagagcaatcttgaaagaccca
agaattctacttttagatgaagccacgagcgctcttgatgcagaatctgagagggttgtg
caggaggcattagacagaattatgattaaccgcactactgtcattgtagcccaccgtttg
agcacagtaaggaatgctgacaccattgctgttatacaaagagggacaatcgttgaaaaa
ggtccacattctgagctagttaaggaccctggaggagcatatagccagcttataaggttg
caagaaatgagcagtgcttcagaacagactgatgtgaatgatcaagaaaggcgtagtagt
gtggaattggattcccagaatagcagccatcattccctctcaatctcatatgatgtggcc
cctgcactaggtttccttgaagtagcacctaaagaatccgatattcctgcttcagaatca
tcagtagtacctccagaagtctcacttcgccgccttgcttacctgaacaagccagagatc
ccagttttaatttttgctactatagctgcaatagccaatgggttaatctttccttttttt
gggctattgattgctagtgtagtcaagaccttctttgagccgccgcatctactcctcaac
aattctaagttttgggcattaattgccattgttcttggagtggggtcttgcgtaacactt
ccatcaagacaatacctttttgctgtggtgggaagtaggttaataaaacgagtccgatca
atgtgttttgagaaggtggttcacatggaagtaagttggtttgacgatcctgagcactca
agtggtgcaattggtgcaaggctttctacagatatcgcttatctccgagggttggttgga
gatgcttttggtttgcatgttcagaactcatcaactgcaattgctggcttggttattgct
ttcgtggcaaattggccactggctcttataacccttgttctgttgcctcttctagcagta
aatggttattttcaagtcaagttcatgaaaggatttagtgccgatgcaaagaaaatgtac
gaggaggcaagtcaagtagcgaatgatgctgtagggagtattagaacaattgcttccttt
tgtgccgaagagaaggtgatgcaaatataccagagaaaatgtgaaggccctattaagaca
gggataagacgagggttaatcagtgggatcggatttggtctatcattctttttgcaattt
tctgtttttgcctgtattttttacgctggatcacaacttgttgcagcaggcaagacaaca
ttctctgatgttttccgggttttcttcgctctcactatggcaactgttggagtgtctcaa
tcgggttcccttgcccccgatttaagtaaaggaaagagctctcttgcgtccatatttgca
attcttgaccggaaatcaaaaatagattctagtgacaactttggaacaaccatagagaat
gtgaagggagaaattgaattacgccatgtgagtttcaagtatccaactaggcctgatgta
ccgatcttccaggacctttgcttgaccatccatcatggcaagacggttgctctggttgga
gaaagtggaagtgggaaatcgacagtagtctcgctgttgcagagattttatgaccctgat
tcgggtcacattacactagatggaatcgaaatccaaaagctacagttgaagtggttgagg
cagcaaatggggctggtgagccaggagcctgtgttgtttaatgacactatccgagccaac
attgcatatggaaaggaaggagatgcaacagaagctgaaattatagctgcagcagaattg
gcaaatgctcacaagttcattagtagtttacaacagggttatgccacagtcgtaggagag
cggggtattcaattgtccggtggacagaagcaaagagtggcaattgcaagagctataatt
aaggcaccaaagattttactactagatgaagccacaagtgcgcttgacgctgaatcagaa
agagttgttcaagatgcgttggaccgagtcatggtggatcgaaccacggtggtggttgct
catcggttatccacgattaagactgcagatttaatcgcggtggtgaaaaatggagtgatt
gcagagaaaggaaagcatgaaaagttgctcaatgtccacgatggcatttatgcttctttg
gttgcagtgcatgcaagtgcctcatcctag
DBGET
integrated database retrieval system
