Malus sylvestris (European crab apple): 126610643
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Entry
126610643 CDS
T09027
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126610643
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126610643
REST complex
126610643
Heterochromatin formation proteins
Other heterochromatin formation proteins
126610643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
126610643
NCBI-ProteinID:
XP_050134706
LinkDB
All DBs
Position
17:complement(3043865..3052895)
Genome browser
AA seq
1398 aa
AA seq
DB search
MKRVRDDVFGGAQLKRPPGSSRGDSQSQIPGGGGGGGGVGVGGGGPIGGVGGASQKLTTN
DALTYLKEVKDMFLDQREKYDTFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLILGFNT
FLPKGYEITLDEDETPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKEHKD
INEVYSEVAALFDEHPDLLDEFTRFLPDASAAASAHQAQYGHNSFPRFNERSSATPTFRP
MHMEKQRRRDRIMTPHADRDLSVDRPELDDDKGMVKVPKEHRKRSEKENRDRRNRDDDDR
ELENDNNRDYKLQRFPDKRKPSRKVEGFGVTANFAPYDDKDSLKSMYSQGFIFCEKVKER
LCSQDDYEAFLKLLNIYSNGIIKRNDLQGLVTDLLGKYSDLMEEFNDFLERCENIDGFLA
GVMSRKSLSSDGPVPSSRSLKVEDKDKEPKREMEGAKEKERYREKYWAKSIQELDLSNCE
RCTPSYRLLPEDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRC
EDDRFELDMLLESVSSTAKRAEELLNSINENKISMETVIRIEDHFTALNLRCIERLYGDH
GLDVMDILRKNPTMALPVVLTRLKQKQDEWTRCRSDFNKVWADIYAKNHYKSLDHRSFYF
KQQDSKNLSSKSLVAEIKELKEKKQIEDDILLAVAAGNRQSIVPHMEYEYLDISLHEDLY
KLVQYSCEEVFSTKEQLNKAMRLYTTILEPMLGVSSRPNDSEDDEDVDKSRNQAKNCIAS
SIGESDGSPGGDSAPVNLKQPKSVCNEEGNALAEVESLANGDNSAKEDGSRDAHPVSRKD
STSEKLQLERDQKNTDVPKKRFLATNTDNAWPSSQPSHPIGADNNHGRTSLEVLSGCVAT
TSRAGASISGNDPLQQGNADAVPSSEGGDIAKPALIANGVFPESTKVKSHHEESLGPSKI
EKEEGELSPIADFGEDNFVVPGDAGVQAKANRSIESRLFQSGNREDISGQEAGDNDADAD
DENSENVSEAGEDVSGSETAGDECSREEQGDDEDAEQDDIDGKAESEGEAEGMADGHLVG
GDGMCSPLSECFLLSVKPLAKHVPGSLLEERKDSRVFYGNDNFYVLYRLHQILYERILSA
KTSSTGAEMKWRTSKDGSSPDLYDRFMSALYNLLDGSIDNAKFEDECRAIIGNQSYILFT
LDKLIYKFVKQLQTVASDETDNKLLQLYEYEKSRKTGKLIDSVYHENARVLIHEENIYRL
EFSSVPSRLSIQLMDSVSEKPEVFAVSMEPNFASYLHNEFLPVFPGKKEPHGITLQRNKR
KYAGQDESSAFCRAMDGVQLVNGLECKIACNSSKISYVLDTEDYFFRMRRKRRTSGARSP
YCDQTRVQRFHKFLSVSS
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagtaagagatgatgtgttcggcggtgctcaattgaagcggccccccggttcg
tcgcgcggggactcgcaatcccagataccggggggaggaggtggaggagggggcgttgga
gtaggtggaggtgggcccattggaggagtaggaggtgcttcacagaaattgaccaccaat
gacgctctaacctacctcaaagaagtgaaggacatgtttctagaccaaagagaaaaatac
gatacatttcttgaggtcatgaaagatttcaaggctcaaagaaccgacacagcaggtgtc
attgcaagagtaaaggaattatttaaagggcataacaacttaattttgggctttaatacc
ttcttgccgaagggttatgagataacccttgatgaagatgagactccaccaaaaaagaca
gttgagtttgaggaagctatcagttttgtaaacaagataaagaaacgtttccaaaatgat
gatcatgtctataaatcattcctggacatactaaacatgtatcgaaaggagcacaaggat
ataaatgaagtttacagtgaggttgctgctctttttgatgagcatccagatttacttgat
gagttcaccagatttttaccagatgcgtcagcagcagcttcagcacatcaagctcaatat
ggccacaattcatttccccgtttcaatgagcgaagctctgctacacccacatttcggcca
atgcatatggagaagcaacgtaggagggataggatcatgacaccccatgctgatcgtgat
cttagtgttgatcgtcctgagctcgacgatgacaaaggaatggtgaaagttccgaaggag
cacagaaagcgtagtgaaaaggagaatagggatagaagaaatcgggacgatgatgataga
gaattagagaatgataacaatagggactacaaattacagcgttttcctgataaaagaaaa
ccctccaggaaggttgaaggttttggtgtgactgctaacttcgctccttatgatgacaaa
gactccttaaagagcatgtacagccagggattcattttctgtgagaaggtgaaggagagg
ttgtgtagccaagatgactacgaggcatttttgaagttgcttaacatatatagcaacgga
attattaaaaggaatgatctgcaaggtttggtgactgatttattgggaaagtattcagat
cttatggaggagtttaatgattttttggagcgttgcgagaatatagatgggttccttgct
ggtgttatgagtagaaaatctctgagtagtgatggtcctgttccttcatctagatccctg
aaggtagaggacaaagataaagagccaaagcgtgaaatggagggagctaaagaaaaggaa
agatacagggagaagtattgggcaaaatctattcaagagcttgacctctctaactgtgaa
cgttgtactccaagctatcggcttctgcctgaagactatccaataccttcagcaagccag
agatcagaacttggtgctcaggttctgaatgaccattgggtatctgtgacttcaggaagt
gaagattactcttttaaacatatgcgcagaaatcagtatgaagaaagtctgttcagatgt
gaggatgataggtttgagttggatatgttgttagagtcggtgagctcaactgctaagcga
gcagaggaactcttgaacagcatcaatgaaaataagatcagcatggaaactgtaatccgt
attgaagaccacttcactgctttaaacttaaggtgcattgaacgtttatatggtgaccat
ggtcttgatgtgatggacatactgcggaaaaatccaactatggccttgcctgttgtatta
actcgcctgaagcagaaacaagatgaatggacaaggtgtagatccgattttaacaaggtt
tgggcagatatatatgccaaaaaccattacaaatcacttgatcaccggagcttctatttc
aagcaacaagattcaaagaacttgagtagcaaatctttggtggctgagatcaaagaattg
aaagagaaaaagcagatagaggatgatatccttctggctgttgctgctggaaacaggcaa
tctatagttccacatatggagtatgaatacttagatatcagcttacatgaagacttgtat
aaacttgtccaatattcatgtgaagaggttttctcaacgaaagaacaattaaataaggct
atgagactttacactaccattttggagccaatgctgggtgtttcttctcgacccaacgat
tcagaggatgatgaagatgtcgacaaaagtaggaatcaggctaagaattgtattgcttca
agcataggagaaagcgatggaagtcctggtggcgattctgccccagtgaatcttaagcag
cccaaatctgtgtgtaatgaagaaggaaatgctttagcagaagttgaaagtttggctaac
ggggataactcagctaaagaagatggaagtcgtgatgcacatcctgtctctaggaaagat
tccacatctgagaaacttcaactagagagagaccagaaaaatacggatgtccctaagaaa
aggtttctggccaccaacacggacaatgcatggccgtccagtcaaccatcacatccaatt
ggagcagataataatcatggtagaacgagcttggaagtgctatcagggtgtgttgcaacc
acatcaagggctggtgcctctattagtggcaatgaccctctacagcaaggaaatgctgat
gctgttccgtcatcagagggtggtgatattgcaaaacctgctttaattgctaatggagta
tttccagaaagcactaaagttaaaagtcatcatgaagagtctcttgggccctccaaaatt
gaaaaggaagagggggaattatcaccaattgctgactttggggaggataactttgttgtc
cctggagatgctggggtgcaagctaaggcaaaccgcagtattgaaagtagactgtttcag
tctgggaatagggaagacattagtggtcaggaagctggagacaatgatgcagatgcagat
gatgaaaacagtgaaaatgtttccgaggctggtgaagatgtctctggcagtgagacagct
ggtgatgaatgttcccgagaagagcaaggtgatgatgaagatgctgaacaagatgacatt
gatggtaaggctgagagcgaaggtgaggctgaagggatggctgatggacatcttgttgga
ggagatggaatgtgttcgccgttgtccgaatgttttcttttatctgtgaaacctcttgcg
aagcatgtaccaggttctttacttgaagaaaggaaagactctcgtgttttctatgggaat
gataatttctatgtgctttataggcttcatcaaattctatatgaaaggattttatctgca
aaaacaagttccacaggtgcagaaatgaaatggagaacttcaaaggatggcagctctccg
gatctgtatgacagatttatgagtgctctatacaatttgctagatggatctattgataac
gcaaaatttgaggatgaatgccgagctattattggaaaccagtcatatatattattcacc
ttggacaaattaatatataaattcgtcaaacagcttcaaactgttgcaagtgatgagact
gacaataagctgcttcaattatatgaatatgaaaagtcccggaaaactgggaagttaatt
gattctgtttaccatgaaaatgcacgtgtcctcattcatgaggagaatatttacagattg
gagttttcctctgtgccctcccgactgtccatccagttgatggacagtgtgagtgaaaag
cccgaggtgtttgcagtttctatggaacctaattttgcatcctatctgcacaatgaattt
ctgccggtttttcctggaaaaaaggagccgcatgggattacccttcagagaaacaagcgc
aaatatgcagggcaagatgaatcctctgccttttgcagggccatggatggtgttcagtta
gtcaatggattggagtgcaagatagcttgcaactcatccaagatctcttacgttcttgac
acagaagattacttcttccgtatgagaaggaaaaggagaacatctggggccagatcaccg
tattgtgatcagacgagagtacagcggttccacaaattcttatcagtctcatcatag
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