Malus sylvestris (European crab apple): 126616036
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Entry
126616036 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126616036
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126616036
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126616036
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126616036
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126616036
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126616036
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126616036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
DUF5760
Motif
Other DBs
NCBI-GeneID:
126616036
NCBI-ProteinID:
XP_050139938
LinkDB
All DBs
Position
3:28773657..28782546
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AA seq
807 aa
AA seq
DB search
MLDPMDLVRSNLSRVRIPEPTNRIYKQECCISFDTPRSEGGLFVDMNTFLAFGKDCVGWN
YEKTGNPVYLHIKQTKVLVPEDRPLKKPTLMAIGVDGGFDNNEPEYEETHNIVLLPDYVT
LPFPSVEFPEKVRLAVDAILLAEGAERKEQLAAWTAEKKQVSAYATNLQQIDNGIIIPSS
GWKCCKCDKRENLWLNLTDGMILCGRKNWDGTGGNNHAIEHYKETGYPLAVKLGTITADL
EGADVFSYPEDDSVLDPLLAQHLAFFGIDFSSLLKTEMTTAERELDQNTNFDWNRIQESG
QEVELIFGPGYTGLVNLGNSCYMAATMQVVFSTHSFYSGYFKNQSLKMAFEKAPADPTVD
LNMQLTKLAHGLLSGKYSVPVTEEKDHTNAIAPTTKLKQEGIPPRMFKALIAASHPEFSS
MRQQDALEFFLHFLDQVERVHSGRPEVDPARSFKFGIEDRIMCSSGKVAYNRRLDYILSL
NIPLHAATNKEELEAFQKLKAEKIAEGKEVSSDEIVRPRVPLEACLASFSSPEEIQDFYS
TGLKAKTTAVKSAGLTSFPDYLVLHMRKFVMEVGWVPKKLDVYIDVPDIIDISHMRSKGL
QPGEELLPEGGEEEEPNEPVADESIVFQLVSMGFNQLHCQKAAINTSNTGVEEAMNWLLS
HMDDADIDAPISQGGQCAVDQSKVDMLISFGFQEDTARKALKASGGDIEKATDWIFNNPD
ASASSDMDATTSDTAPTAIDAGLPDGAGRYRLIGIVSHIGTSTQCGHYVAHILKDGRWVI
FNDDKVGASVNPPKDMGYLYFFERLSS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccccatggacctggtccgatccaatctctcccgggttcggatcccggaaccc
accaaccgcatctacaagcaagaatgctgcatctctttcgacactccgagatcagaaggt
ggtttgtttgtggacatgaacacatttcttgcttttgggaaggattgcgtgggctggaac
tatgaaaagactggaaatccagtttatttgcatataaagcaaacaaaagtgttggttcct
gaagatagacctttgaagaaacccacactcatggctataggtgtcgatgggggatttgat
aacaatgaacctgaatatgaagaaacacacaatatagtcctactgcctgattatgtaact
cttccatttccttctgtcgaattcccagagaaggtaagattggctgttgatgccatttta
ttggctgagggtgctgagaggaaagaacaacttgcagcatggacagctgagaagaagcaa
gttagtgcttatgcaacgaatttgcaacagattgacaatggtattattattccttcatct
ggctggaaatgttgcaagtgtgataaaagagaaaacctttggttaaatctaactgatgga
atgatcctttgtgggagaaaaaattgggatggaactggtggcaacaaccatgccattgaa
cactataaggaaacgggctatcctcttgctgtaaagctggggacaattacagctgatctg
gaaggagcagatgttttctcatacccagaggatgatagtgtattagacccacttttggcg
caacatctggcattttttggcattgatttttcatcattactgaagacagaaatgacaact
gctgaaagagagcttgaccagaataccaattttgactggaaccggattcaagaaagtgga
caggaggttgaactgatatttggacctggttacactggacttgtcaatcttggaaacagc
tgttatatggcagcgactatgcaagttgtgttttcaacacactctttctattccggatac
ttcaagaatcaaagtttgaaaatggcttttgagaaagcaccagctgaccccactgtagac
ctgaacatgcagttaacaaagctggcgcatggtttgctgtctggtaaatactccgtacct
gtaaccgaggaaaaagatcatacaaatgccattgcccctacaacaaaattaaaacaggaa
gggatacctcctcgtatgtttaaagcgcttatagctgccagccatcctgaattttcctcc
atgagacaacaggatgccttggagttcttccttcattttcttgaccaagttgaacgagtt
cattctggaagacctgaagtggatcctgcgaggagttttaagtttggcattgaagatcgt
attatgtgttcgtctgggaaagttgcttacaatagaaggcttgactacattctctcatta
aacatcccacttcatgcagccactaataaagaagaacttgaagcctttcaaaaattgaaa
gcagaaaagattgcggaaggcaaggaagtatccagtgatgagattgtacgtccaagggtt
cctctagaagcatgccttgcaagcttttcatctcccgaagagatacaggatttttacagc
actggtttgaaggccaagacaacggctgtgaagagtgcaggtctaacttcgttccctgat
tatctggtgttgcacatgcgaaagtttgtaatggaagtgggctgggtgcccaaaaaacta
gatgtatatatagatgttcctgatatcatagatatcagtcacatgcgcagcaagggactc
caacctggtgaagagttgttgccggagggcggggaagaggaggaaccaaatgagcctgtt
gccgatgagagtattgttttccagcttgtttcaatgggttttaatcagttacactgtcag
aaagctgccattaatacgtcaaatactggagtggaagaggcaatgaattggctactttca
cacatggatgatgcagatatagatgctcctatttctcaagggggacagtgtgcggttgat
caatcaaaagttgatatgttgatttcatttggttttcaagaagacactgctcggaaggca
ctgaaagcatcgggtggtgacatcgagaaagccacagattggatattcaacaatcctgat
gcttctgcttcatcggacatggatgcgacaacatctgacactgcacctactgcgattgat
gctgggctgcctgatggagcagggagatatagactcattggaattgtaagccacatcgga
acatctactcaatgtggtcattatgttgctcacatcttaaaagatggcagatgggttatt
ttcaacgacgacaaagttggagcttccgttaatcctcccaaggacatgggatacctttac
ttctttgagagacttagtagttaa
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